Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03947 ATGGTGATGAGGATCAATATTGACTGCAATGGTTGTTATAGAAAAGTGAAGAGAGCCCTTCTTGGAATGCCAGAGTTGGAGAGCCATTTCCTAGAGAAGAAGCAAACAAGAGTAATTGTATGTGGCAGTTTCATCCCTCAAGATGTTGCAATCAAGATAAAGAAAAAGACCAATAGAAGAGTTGAAATATTGGACATACAAGATTTGAGTGAAAACAATGATGAAAATGTTGAAGATCAAAAACCAATTACTAGCCCCCAAAAACCAATTGAAAGAAACATGTTTGGTAGCTTGATAGAAACAAAGAGAGATATGCCTCCTCTCAATCATAGAGTTCACTACACATCAACTGTCTCTTATATTTAA 366 0.3579 MVMRINIDCNGCYRKVKRALLGMPELESHFLEKKQTRVIVCGSFIPQDVAIKIKKKTNRRVEILDIQDLSENNDENVEDQKPITSPQKPIERNMFGSLIETKRDMPPLNHRVHYTSTVSYI 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03947 121 Gene3D - 1 71 - -
Trre3g03947 121 PANTHER OS08G0431150 PROTEIN 1 86 - -
Trre3g03947 121 MobiDBLite consensus disorder prediction 71 90 - -
Trre3g03947 121 SUPERFAMILY HMA, heavy metal-associated domain 3 61 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03947 Trre-Chr3 50611885 50612828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03947 - - tpra:123885163 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03947 3 50611885 50612828 Trre3g03947 3 50611885 50612828 ECH