Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03946 ATGGCTTCTCTTATTCATTGCAATCTAGTTTCTCTTTTCTTTCACATTTTTCTCTTGCTGATAATTTCCTATCCACCCAATATACTCTCACAAGATCCTAGCTCCTCAAACCCAACTATAGCTCCATGCACATCAACCCTCCTTCCCCTCTTTCCCTGCTTGCCATTCGTGCAGGGCGCCGTTAGAACTCCGGCGTCCGGCTGTTGTAGTAACCTCGAGCAAATCTATAGCCAACAACCACATTGCCTTTGTTTCTTGTTCAATGGCACTGCCTTTACCTCTTTCCCTATAAACAGAACACTTGCTCTACAAATCCCAGATCTTTGTAACCTTCAAGTCAATAGCTCAGTTTGTCTAGGGGAGAAAATACATGTGCCTCCACCAACTTCACCAAATTCTCAAGTTTCCTTTGGGACAAAGAACAACTCTACTGTTGCTGCTTCTCCAGCTTTTAAAGTGCCACCAAGACCAAGCATCATTGGATATGGATTTGCAAGAAGTGAAGCTATTAACTTGAAGGCAAAGAATGGAATAATTGTTATCATAAATATAACAATTTTTGTGTTCATATTGGTATCTTGA 582 0.4107 MASLIHCNLVSLFFHIFLLLIISYPPNILSQDPSSSNPTIAPCTSTLLPLFPCLPFVQGAVRTPASGCCSNLEQIYSQQPHCLCFLFNGTAFTSFPINRTLALQIPDLCNLQVNSSVCLGEKIHVPPPTSPNSQVSFGTKNNSTVAASPAFKVPPRPSIIGYGFARSEAINLKAKNGIIVIINITIFVFILVS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03946 193 CDD AAI_LTSS 50 111 - -
Trre3g03946 193 SMART aai_6 43 118 IPR016140 -
Trre3g03946 193 Pfam Probable lipid transfer 34 118 IPR016140 -
Trre3g03946 193 Gene3D - 39 116 IPR036312 -
Trre3g03946 193 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 31 143 IPR043325 -
Trre3g03946 193 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 120 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03946 Trre-Chr3 50601480 50602503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03946 41 187 Acyl Lipid Metabolism Gene Families AT1G73890 47.500 3.39e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03946 - - gsj:114418601 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03946 3 50601480 50602503 Trre3g03946 3 50601480 50602503 ECH