Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03924 ATGCCATGTTCTAAAGAAGAAGCTCTTATTAGACTCTTCTACAATTCATCAAGCTCTTTCAAACTTCTCTTCCTCTTTCTCTTCTCTTCTTCCACTTTGGTTATTAAATTCTTAAACTTCATTGGTAGTTACTCTTTATTCCAAAGGGATCAACAATATGAATATGTTTCTTCCGAGTATGATTACGAAGAAGAAGACGAACAAGAAGAAGAAGAAATTCGAGAAAATTATTGTTATGAAGATTCTTTTGAGAAAGATCATTTAGTAGCTGATATAATTTGTGGTGGAGAATCTCTTGTTTTCTTGCATAATAATATTAACAAGTCTCAAAGGAATCATTATTCTTCATCTTTTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTTTATAACACCACAAGATAGCTTGATAGAAGAGTATGCAGAAGAAGAAAAAAATTCAACAGAAAGTTTATATGTTCATCAAGAATCACCAATTGTTTCAGATTTTGAGACAGAAACAAATGAAACAGAATTTCAAACAGAAGAAGAAGATGCTGATTCTGTTCATGATTCTGTTCCTGATTCTGTTCCAGTTGAAAACAGGACCACTTCTCCTATCACACTTAATCTATACAAAAGTGGTGACTTAGTAGAAGATATTGACAAAAATAATGATGAAGAAAATGTTGATATTGGAATTATTAAAAATAAGAAAGAGCAAGAAGAAAAAATTACAAGAGATGAGAGACTTTTTGTTATTGGTCCTACACAATTAGAGACAAATAAGAAGTTAATAATTGAAGAAAAAGATGATGAAGAAATATATGGTGATACAACAACTGTTGGTTCAACATCTAAAAGCTCTTCTGATTGGAGAAGCTCAATTCTTTGTAGAGATTCTGGAACTGATGATCCTTTTTCTTCATCAAGAGGAAGTTGTCTTAAATGGGAATCTTACACTGTTTTTCAAAAATATGATGAAGAAATGTCATTTCTAGAAAGGATTAGTGCACAAAAACTTCATGAAACAGAGTCTTTGAGGTCTATTAAAGTATCTCCAAGGTCAATTTCCGAGAGAATTGTGTACAAATTTTCAAGTATAAATAAAAAGCCAGAAGATATAAGTCATAATCCATATCATGAATTGGAAGGTGCATATGTTGCACAAATATGCTTAACATGGGAAGCACTTAATTGGAACTACAAGAATTTTCAAACAAAAAGAGCTTCAAATGTTGATGTTGGTTGTCCAGCAACAATTGCACAACAATTTCAACAATTTCAAGTTTTGTTGCAAAGATATGTAGAGAATGAACCTTATGAGTATGGTAGGAGACCTGAAATTTATGCTAGAATGAGACATTTGGCACCAAAATTGCTCCTAGTCCCTGAATATAGAGATTCAGATGATGATCAGAAGGAGGAGAATATTGGGTTTAACACTAAAATATCATCAGCTTCATTTCTTGTGATAATGGAAGATGGAATCAGAACATTCATGAATTTCCTAAAGGCTGATAAAGAGAAACCATGTCAGATCATTGCATCTTACTTTAGGAGAAATCAAAGAGGCTTGGTTGATCCAACATTAATCCGTCTTATGAAGAAAGTTAATCAAAAGAAGAAGATAAAAGTTAAGGATATTCGTCGTTCACACAAATGCTTGAGGAAAAGAAAGTTAAAGGAGGAAGAAGAGATGGAGATTTTGATGGCATTGATAGACTTAAAAATTGTGTCAAGGGTTTTGAGAATGTGTGACATGAATGAAAATCAATTACATTGGTGTGAAGAGAAAAATAGCAAAGTTAGAGTCATTGATGGGAAACTACAAAGAGATTCCACTCCACTTTTTTTTCCATCACATTGA 1848 0.3231 MPCSKEEALIRLFYNSSSSFKLLFLFLFSSSTLVIKFLNFIGSYSLFQRDQQYEYVSSEYDYEEEDEQEEEEIRENYCYEDSFEKDHLVADIICGGESLVFLHNNINKSQRNHYSSSFQEEEEEEEEEFITPQDSLIEEYAEEEKNSTESLYVHQESPIVSDFETETNETEFQTEEEDADSVHDSVPDSVPVENRTTSPITLNLYKSGDLVEDIDKNNDEENVDIGIIKNKKEQEEKITRDERLFVIGPTQLETNKKLIIEEKDDEEIYGDTTTVGSTSKSSSDWRSSILCRDSGTDDPFSSSRGSCLKWESYTVFQKYDEEMSFLERISAQKLHETESLRSIKVSPRSISERIVYKFSSINKKPEDISHNPYHELEGAYVAQICLTWEALNWNYKNFQTKRASNVDVGCPATIAQQFQQFQVLLQRYVENEPYEYGRRPEIYARMRHLAPKLLLVPEYRDSDDDQKEENIGFNTKISSASFLVIMEDGIRTFMNFLKADKEKPCQIIASYFRRNQRGLVDPTLIRLMKKVNQKKKIKVKDIRRSHKCLRKRKLKEEEEMEILMALIDLKIVSRVLRMCDMNENQLHWCEEKNSKVRVIDGKLQRDSTPLFFPSH 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03924 615 PANTHER DNA LIGASE (DUF1666)-RELATED 12 615 - -
Trre3g03924 615 MobiDBLite consensus disorder prediction 165 195 - -
Trre3g03924 615 Pfam Protein of unknown function (DUF1666) 375 613 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03924 Trre-Chr3 50332686 50337516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03924 - - tpra:123885200 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03924 3 50332686 50337516 Trre3g03924 3 50332686 50337516 ECH