Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03895 ATGAAGAGCAACAGTAAGGATCAAGAAGGTATAGGTATAACCTCATCATATCTAAACTTTTTCAATGCTCAATTATATCTTTTCAATTTCTTCGGTCATATTCTAGTATTTGGTTGTGGTTTAGTCATAGGTATCACCCTCACTTTTTGTGTCAAAAATTTTTCATTCAATTTTCAATTCCAACAATTTCAAGATTCAACTTTTAGCTCTAATCCACCCCCTCATTTTCCTCCTGCACCTCCAATCTCATCAAACAACTCAAATCCATCAAATGACCAAACCAAACTTTCCATCAAACAAAATAGTTTTGTTATTACCAATACTACTAATCCTAGTTCAAATGGGTTGGAAGAATTTTTGAAGATTCCAAAGGCTATGCATGATATGAATGAAGATGAATTATTTTGGAGAGCTTCTATGATTCCTACGATTCATAAACTTCCTTTCAAACAAACACCAAAGGTTGCATTTATGTTTTTGACAAAAGGTCCGGTTTTATTGGCTCCACTTTGGCAGAAATTCTTCAAAGGTAATGAAGGGTTGTATTCAATCTACATTCATCCAAATCCTTCTTTTGACGAAACAGTTTATGATCAAAGCTCTATCTTTTATGGCCGCAGAATTCCTAGCAAGGAGGTAAAGTGGGGTGAGAATAGCATGATAGAGGCAGAGAGACGTTTACTAGCAAATGCATTACTTGATTTCTCAAACCAACGTTTTGTACTACTTTCAGAAGCATGCATACCATTATTCAATTTCTCCACAATCTACAATTATCTAATGAACTCAAAAGAAACTTTCATTGAAGCCTATGATCTAGAAGGTGGTGTAGGACGTGGAAGATACAATAACAAAATGAGACCATTGATTAAACTTTCACAATGGAGAAAAGGATCACAATGGTTTCAAATTGATCGTAACTTAGCACTTCATATCATTTCTAACACATTATATTTTTCTATGTTCAAGAAATTTTGCAATCCTCCATGCTATAGTGATGAACATTATTTGCCAACATTGGTTAGTATCAAATTTTGGAAGAGGAATTCTAATAGGACATTGACTTGGGTTGATTGGTCAAAAGGTGGACCCCATCCTTCAAAGTTTATTAGACCACATGTGACTATTGATTTTTTGGAGAGGTTAAGGTTTGGAAGCACTTGTGAGTATAATGGAAAGACAACCAATGTTTGTCATTTGTTTGCAAGGAAATTCACTCCTCATGCTTTGGATAGATTGCTTAGATTTGCACCAAAGTTGATGCAATTCAATTGA 1275 0.3451 MKSNSKDQEGIGITSSYLNFFNAQLYLFNFFGHILVFGCGLVIGITLTFCVKNFSFNFQFQQFQDSTFSSNPPPHFPPAPPISSNNSNPSNDQTKLSIKQNSFVITNTTNPSSNGLEEFLKIPKAMHDMNEDELFWRASMIPTIHKLPFKQTPKVAFMFLTKGPVLLAPLWQKFFKGNEGLYSIYIHPNPSFDETVYDQSSIFYGRRIPSKEVKWGENSMIEAERRLLANALLDFSNQRFVLLSEACIPLFNFSTIYNYLMNSKETFIEAYDLEGGVGRGRYNNKMRPLIKLSQWRKGSQWFQIDRNLALHIISNTLYFSMFKKFCNPPCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSKGGPHPSKFIRPHVTIDFLERLRFGSTCEYNGKTTNVCHLFARKFTPHALDRLLRFAPKLMQFN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03895 424 MobiDBLite consensus disorder prediction 68 93 - -
Trre3g03895 424 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 94 414 IPR044174 GO:0016757
Trre3g03895 424 Pfam Core-2/I-Branching enzyme 155 382 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03895 Trre-Chr3 49979519 49983231 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03895 - - gmx:100791882 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03895 3 49979519 49983231 Trre3g03895 3 49979519 49983231 ECH