Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02894 ATGGATTCCCCACCTTCCCAACAAACGTGGGGAAGATCATCAACCCTTTCCACTACACATCTCAACCGTACAACTTCATCACCTTCCTCATCTTCTTCCCCATCTTTCTCCAAAGATTCAATCCAAAGCCTCTCTTCCATTCTCAACAACCCTCTCTCTTCAACCACCGTTTACCCTCCCGAATTTTCCCCAATCTCTTCAACCAAAGCCACCTCCGAAGTCACCCGATCTGATTTCATCTCTTACCTAACAACCGTCTCCGATCCTTTTCACCGATTCGACGACATCCGTAAACACGCTACCAAAGAGATCTCCGGTAACGACGTCGATGGTGCTGGTGCTGGTGAAGCGCTTGTAGCTTGTTTACGCGAGGTTCCGTCGCTTTACTTTAAAGAAGATTTTCGATTGGAAGAAGGTGCTACGTTTCGTGCTGCGTGTCCTTTTTCGACGTTCAACGAGAACGCTGTGTTGCAGGAGAAGCTTTCGCAGTATCTTGATGTGGTTGAGCTTCATCTTGTTAAGGAGATCTCCCTTCGGTCTTCGTCGTTTTTTGAAGCGCAGGGGCAGTTGCAGGATCTTAATGGTAAGATCGTTGAAGGATGTGCGAGGATTCGTGAATTGAAGGATACGGTTCAGCTTATTGATTCGGATTTGGTTGAGTCTGCTAGGCAGATTCAGCAGCTCAATGGCACCAGAACGAATCTGTTGGCGCTTCAGCAGAAACTCAGACTTATTTTATACGTTAATCAAGCACTCTCGGCTCTCAAATTGCTTGTTGCATCTGCAGATTGTGCTGGAGCACTGGACGTAACCGATGATTTGCAACATTTGCTGGATGGAGATGAGCTCACTGGCTTGCATTGCTTTCGTCATCTTAGAGATCACGTGACAGGATTTATAGAATCCATAAACAGCATTCTTTCAGCAGAGTTTGTTCGAGCTTCTTTACACGATGCTGCAGAATCAGATGCAATAATTTTATCTAAAGCTAAAGCAAGAGCTTCTATTCCCATGAATGGAAAAGATGAAGTAAAGTTGGAAGAAGAAGAAACAACTAATTTCAAAGATAGTCTTCTCCCTACAGTAATTGGCTTGCTTAGAACTGCTAAACTTCCCTCTATTCTAAGGATCTATCGAGACACACTGACTGCTGATATGAAGAGTGCTATTAAGACTGCTGTTGCTGAGTTGCTTCCAGTTCTTGCTGCCCGAGGTTCAGAATCAGAGTTCTTTTCTGGAGACAGAGCTATAGAGGCAGATGGTGGTGGTGCTTCACTTGCCAGCAAGTTAAGGAGTCTGTCGTCTGATTGCTTTGTCCATCTTTTGAGTGCTATTTTCATGATAGTACAGGCCCATTTAGTGCGGGCCGCTGAAGTGAAAAAAGCCATTGAATGGATTTTGAGCAACTGTGATGGTCATTATGCTTCTGATTCAGTTGCAGCGGCAATTGCTCATGGTGCTGCAGCGGCAGAAATTTCCCAAGAAAGTGAGGTTCATGGTACTACGTTTTTGTCATATTCACCGCAAAGAAATGTTGCCAAGGGTCCCTCTTTTCAGGGAAAAGCAATTGATGCTGCGAGCTCCTCAAACATGTCAAAAAATTTCAGAGCTGATGTATTGCGAGAAAACGCAGAAGCTGTCTTTGCAGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTGGGGGTCCGTGCCGTTCTCCATCCTAGGTTGAAACTGCAGGAGTTTCTAACTATTTACAACATCACCCATGAGTTCATTACAGCTACGGAAAAAATTGGTGGAAGATTGGGATACAGCATCCGTGGGACACTGCAGTCACAGGCCAAGGCTTTTATTGATTTTCAGCATGATTCTCGGATGACAAAAATTAAGGCAGTGCTTGACCAGGAAACTTGGGTGGAGATAGATGTTCCTGATGAATTTCAATCCATTATCAATATGCTTTTTTCATCGGATGCACTGTCTTCTGGGAACCTTAATGGTGTTGAAGAAGATAATTCAATCAGTTACCATGATATGGCGACAACCAATGATGCGCGGCCGATGGCAGACACTGGACAGTCAAATGCTGAACAGAATGTCGAGCAGACTGATTCCACAGAAGAATCTAAGAAACCAAATAGAGGTCATAGTAAATCGGTAGAAAGTATCAGCACTGAGAAAGATCATAAGAAGTCTGCATCTCAGGCTCTTGTTTACAAAGGTGTTGGTTATCACATGGTAAACTGTGGCCTGATATTGCTGAAGATGTTGTCAGAATATATTGATATGAACAGCCTTTTGCCAACACTATCGTCAGAAGTTGTTCACCGTGTGGCAGAAATCTTGAAGTTTTTCAACACAAGAACATGTCAACTTGTGCTAGGAGCTGGTGCAATGCAGGTATCTGGTTTGAAGTCCATAACCTCTAAACACCTGGCGCTGGCAAGTCAAGTCATTAGCTTCATACATGCTATTATTCCCGAAATTCGGCAGATTCTTTTCCTGAAAGTACCAGAGACTAGAAAATTGCTATTGCTTTCAGAGATTGATCGAGTTGCGCAGGATTATAAAGTCCATAGAGATGAAATACATACTAAATTGGTTCAGATAATGCGAGAAAGATTATTAGTACATTTGCGTGGGTTGCCTCAAATTGTTGAGAGTTGGAATAGACCTGAGGATGCTGATCCCCAGCCTAGTCAATTTGCTCGGTCCCTTACAAAGGAAGTTGGATACCTCCAGCGTGTTCTATCTCGAACCTTGAATGAAGAAGATGTTCAGGCAATTTTCAGGCAAGTGGTGGTTATTTTTCACTCACAAATTTCAGAAGCATTTTCAAGATTTGATATAAGCACTTCACAAGCACAGAATAGGTTATATCGGGACATCAAACATATTCTCCAATGCATACGGTCATTGCCATCGGGTGATTTAAATAAATCTGATACCCCTAACTGGGGTCAGCTGGATGAATTCTTGGTGCAAAGATTTGAGAATGATGCTGTTCAGTAA 3000 0.433 MDSPPSQQTWGRSSTLSTTHLNRTTSSPSSSSSPSFSKDSIQSLSSILNNPLSSTTVYPPEFSPISSTKATSEVTRSDFISYLTTVSDPFHRFDDIRKHATKEISGNDVDGAGAGEALVACLREVPSLYFKEDFRLEEGATFRAACPFSTFNENAVLQEKLSQYLDVVELHLVKEISLRSSSFFEAQGQLQDLNGKIVEGCARIRELKDTVQLIDSDLVESARQIQQLNGTRTNLLALQQKLRLILYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDHVTGFIESINSILSAEFVRASLHDAAESDAIILSKAKARASIPMNGKDEVKLEEEETTNFKDSLLPTVIGLLRTAKLPSILRIYRDTLTADMKSAIKTAVAELLPVLAARGSESEFFSGDRAIEADGGGASLASKLRSLSSDCFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNCDGHYASDSVAAAIAHGAAAAEISQESEVHGTTFLSYSPQRNVAKGPSFQGKAIDAASSSNMSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITHEFITATEKIGGRLGYSIRGTLQSQAKAFIDFQHDSRMTKIKAVLDQETWVEIDVPDEFQSIINMLFSSDALSSGNLNGVEEDNSISYHDMATTNDARPMADTGQSNAEQNVEQTDSTEESKKPNRGHSKSVESISTEKDHKKSASQALVYKGVGYHMVNCGLILLKMLSEYIDMNSLLPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIHAIIPEIRQILFLKVPETRKLLLLSEIDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFRQVVVIFHSQISEAFSRFDISTSQAQNRLYRDIKHILQCIRSLPSGDLNKSDTPNWGQLDEFLVQRFENDAVQ 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02894 999 MobiDBLite consensus disorder prediction 679 698 - -
Trre3g02894 999 Gene3D - 838 877 - -
Trre3g02894 999 MobiDBLite consensus disorder prediction 699 724 - -
Trre3g02894 999 PANTHER VACUOLAR PROTEIN SORTING 54 5 962 IPR039745 GO:0000938|GO:0042147
Trre3g02894 999 MobiDBLite consensus disorder prediction 1 38 - -
Trre3g02894 999 Pfam Vps54-like protein 740 870 IPR012501 GO:0042147
Trre3g02894 999 MobiDBLite consensus disorder prediction 679 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02894 Trre-Chr3 33491180 33508938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02894 K17600 - gmx:100804432 1536.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02894 3 33491180 33508938 Trre3g02894 3 33491180 33508938 ECH