Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02893 ATGAACATCTTCAAGAAGAAAACCTCACCCAAAGAAGCTCTGCGACAAAGTAAGAGGGAAATGTCTATTGCAACTAGAGGAATTGAAAGAGAGATAGCATCGCTTCAGATGGAGGAAAAGAAGTTGGTGGCAGAGATTAAAAAAGAAGCAAAAACTGGAAATGAGGCTGCTACAAGAATCTTGGCTCGTCAACTAGTTAGACTACGCCAACAGATAACCAATTTGCAGGGAAGTCGTGCTCAGATCAGGGGTGTAGCAACTCACACACAGGCATTATATGCAAGCACTTCGATCTCGACAGGGATGAAGGGTGCAACTAAAGCAATGGTGGCAATGAATAAGCAAATGGCACCGGCAAAGCAGGCTAAAGTGATACAAGAATTCCAAAAGCAATCAGCACAAATGGACATGACGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCCGAGGAAGAATCTGAAGAGCTCACTAACCAGGTTCTTGATGAAATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGTCGGATTGCTTCAAGGACAACTGAAAATGTTGCTCCAAGATCAGAATCTCAAGATGTTGAAGAACTTGAAAAGAGATTGGCTTCCCTCCGAAGAATATAA 651 0.4209 MNIFKKKTSPKEALRQSKREMSIATRGIEREIASLQMEEKKLVAEIKKEAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIQEFQKQSAQMDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQLSSAPKGRIASRTTENVAPRSESQDVEELEKRLASLRRI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02893 216 MobiDBLite consensus disorder prediction 180 216 - -
Trre3g02893 216 Coils Coil 145 165 - -
Trre3g02893 216 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 214 IPR005024 GO:0007034
Trre3g02893 216 Gene3D - 4 181 - -
Trre3g02893 216 Pfam Snf7 17 185 IPR005024 GO:0007034
Trre3g02893 216 MobiDBLite consensus disorder prediction 181 197 - -
Trre3g02893 216 MobiDBLite consensus disorder prediction 198 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02893 Trre-Chr3 33473436 33480507 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02893 K12191 - gmx:100777179 365.54