Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02890 ATGGCTTCAAGAAATGGTGAAGAGAAAGTTGAACTTGGTTTCAATGATGTTAATGAGACAAAGGCAAAGAAGGATTGGATCCTTTTGTCACTTAGGGTGGTTGCATTTTTTGCTACTTCAGCTGCAACACTTGTGATGGCACTAAATAAACAAACCAAAAGTTTGATTGTTGGTACCATTGGTAGCACCCCAATAACTGCTACTCTTTCTGCCAAGTTTAATCAAACTCCAGCTTTTGTGTTCTTTGTGATTGCCAATGGAAATGCTAGTCTCCATAACTTGGTGATGATTGCATTGGATATACTAGGACCCCAATATGATTACAAAGGACTTCGCCTTGCATTGATTGCAATATTAGACATGTTAACTATGGCTCTAGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCAGAATTGGGAAGAAATGGAAATTCACATGCAAGATGGGATAAGATTTGTGACAAATTTGAAAGCTATTGCAATAGAGGTGGTGGTGCACTCATTGCTTCTTTTATTGGCTTCATTCTTCTCTTGATTATCACAGTCATGTCCATTGCAAAGCTTCTCAAGCCAAATCGCATTAACCATGCTCCTAGTCCTTGA 606 0.3927 MASRNGEEKVELGFNDVNETKAKKDWILLSLRVVAFFATSAATLVMALNKQTKSLIVGTIGSTPITATLSAKFNQTPAFVFFVIANGNASLHNLVMIALDILGPQYDYKGLRLALIAILDMLTMALASAGDGAATFMSELGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSIAKLLKPNRINHAPSP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02890 201 PANTHER CASP-LIKE PROTEIN 1U1 22 189 IPR044173 -
Trre3g02890 201 NCBIfam plant integral membrane protein TIGR01569 29 188 IPR006459 -
Trre3g02890 201 Pfam Casparian strip membrane protein domain 23 177 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02890 Trre-Chr3 33322440 33323693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02890 - - gmx:100792043 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02890 3 33322440 33323693 Trre3g02890 3 33322440 33323693 ECH