Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02884 ATGGCGTCCTCTGATCCCAACAAGTTATTATCCAAAGCTGATAAATTAACAAAACTCAGTCTCACAAGGTGGAGTGCTGATTGGAAGACTGCTACTGTTCTTTATGAACAAGCTGCTAATGGGTTTAGAGTTTCCAAGAACCTTGAGAAAGCTAAAACGGCGTATGAGAAAGCTTCGCAAGGACAGCAAATGCTTTCTTCACCTTGGGACGCTGCTAAGCACATGGAATCTGCCGCTGCTCTGGCTAAGGAACTAAGCAACTGGAGAGAAGTTGCGGACTTCTATCAAAAGGCATCTGAATTGTACATGGAGTGTGGGAGACCAAAACCTGCATCGGATGCTCTTGCAAAGGGAGCTCGTGCTTTGGAAGATACAATGCCTGAAGAAACTATTCAGTTATATACAGATGCTATTACAATTCTTGAAGACGATGAAAAGGAACAGATGGCCTTTGATCTATACCGTGCTGTAACTAGTGTTTATATAAAACTTGAGAAACATACAGATGCTGCATCTTCCCTGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAATAGTCAGACCAAGGCTTATCTTAGTGCGATTATTGTCTACCTTTACGCTCACGACTTTAAGCAAGCAGAGCAGTGCTACAATGACTGTTCTCAGATTGATGCTTTTCTCAAAAGTGACCATAGCCGTTGCGCTGGCAAGTTCCTTTCTGCTTACACAGATGGAGACGTCGACGAAATAAAAAAAATTGCGCAGTCTAGCGCTGTTTCCCATCTTGACCACGCAATCATTAGGCTTGCGAGGAAACTTCCAACCGGCGATGTGAGTTCATTAAAGTCTGTCACTGCCGAAGATGATGAAGAGCCACTGGACGAAAATGACCTGACCTAA 891 0.4388 MASSDPNKLLSKADKLTKLSLTRWSADWKTATVLYEQAANGFRVSKNLEKAKTAYEKASQGQQMLSSPWDAAKHMESAAALAKELSNWREVADFYQKASELYMECGRPKPASDALAKGARALEDTMPEETIQLYTDAITILEDDEKEQMAFDLYRAVTSVYIKLEKHTDAASSLLRLGLAADKCNATNSQTKAYLSAIIVYLYAHDFKQAEQCYNDCSQIDAFLKSDHSRCAGKFLSAYTDGDVDEIKKIAQSSAVSHLDHAIIRLARKLPTGDVSSLKSVTAEDDEEPLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02884 296 FunFam Gamma-soluble NSF attachment protein 3 272 - -
Trre3g02884 296 Pfam Soluble NSF attachment protein, SNAP 5 260 - -
Trre3g02884 296 SUPERFAMILY TPR-like 7 250 IPR011990 GO:0005515
Trre3g02884 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 275 IPR000744 GO:0006886
Trre3g02884 296 Gene3D Tetratricopeptide repeat domain 3 272 IPR011990 GO:0005515
Trre3g02884 296 MobiDBLite consensus disorder prediction 277 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02884 Trre-Chr3 33276405 33281484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02884 K21198 - gmx:100790986 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02884 3 33276405 33281484 Trre3g02884 3 33276405 33281484 ECH