Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02780 ATGGATCATAAGCAACCATTATCATCATCTGCAAAACCAAAAACTGCTGAATTGGATGCACCCCTTCATACAATTGGTTTTGAATTTGAAGACATATCAGCACACAAAGTTTCTGGCAATCTTCATCTTACTCAAAAATGTTGCCAGCCATTTAAGGTACTTCATGGAGGTGTATCAGCATTGATATCAGAATCATTAGCAAGTATTGGAGCACATATTGCTTGTGGTTATAAAAGAGTTGCTGGAATTCAACTTACAATTAATCATTTGAAATCAGCTGTTATTGGTGATTTTATTCATGCTGAAGCCACCCCTTTAACTGTTGGTAAATCCATTCAGGTGTGGGATGTGAGAATCTGGAAGATTGATCCTTTAAACTCACAAAACAGAACGTTGATAGCATCTTCTAGAGTAACTTTGAAAAGCAACATGCCTGTTCCAGAAAATGCAAAAGAAGCTGGTGACATTCTAAAGAGGCATGCAAAACTGTAA 492 0.3679 MDHKQPLSSSAKPKTAELDAPLHTIGFEFEDISAHKVSGNLHLTQKCCQPFKVLHGGVSALISESLASIGAHIACGYKRVAGIQLTINHLKSAVIGDFIHAEATPLTVGKSIQVWDVRIWKIDPLNSQNRTLIASSRVTLKSNMPVPENAKEAGDILKRHAKL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02780 163 CDD PaaI_thioesterase 24 141 - -
Trre3g02780 163 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 4 162 - -
Trre3g02780 163 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 8 143 - -
Trre3g02780 163 Gene3D Hotdog Thioesterase 7 143 - -
Trre3g02780 163 NCBIfam hotdog fold thioesterase 23 140 IPR003736 -
Trre3g02780 163 Pfam Thioesterase superfamily 52 124 IPR006683 -
Trre3g02780 163 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 22 141 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02780 Trre-Chr3 29971998 29974761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02780 K19222 - zju:125419446 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02780 3 29971998 29974761 Trre3g02780 3 29971998 29974761 ECH