Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02601 ATGGCTTCTACTGTAGGTTGTGTGACACTAACCTCAAGCTTGGTTTTAGCTATTTTATTTGCTCTCACAGTTCAAGTCTTCTACTTCTCACCAATAGATCCACTTTTGCTAGAAATACCACCTGCTGTATTTTCAATTTCTTCAACCAAAAACAACAAATTACAGAATGTGATTAAACTTGGAGAAGGGTTTATGAAGCAACCAGAAGATGTTTGTGTGGATAAAGATGGTGTCTTATATACAGCTACAAGAGATGGTTGGATTAAAAGAATGGTTAGGAATGGAAAATGGGAGAATTGGAAGCATATAGATAGTTCTACTTTGCTTGGAATCACAACATCAAAAGATGGTGGTCTCATTGTGTGTGATGCTAGTTTGGGTTTGCTCAAGGTTACAGAAGATGGTTTCAGTGTTATCCTTTCACAAGTAAATGGTTCTCAATTAATATTAGCGGACGATGTAATAGAAGCATCAGATGGGAATATATATTTCAGTGTTGCTAGTACTAAATTTAATTTACACAATTGGCACCTGGATTTGCTAGAGGCAAGACCTCATGGACAACTTTTAAAGTACAATCCCATATCAAATGAGACTGCTATTGTTCTTGATGATTTGTTTTTTGCAAATGGTGTTGCACTGTCCAAGGATGAAGATTATCTTGTAGTCTGTGAAACTTGGAAATTTAGGTGTCTTAAACTTTGGCTAAAAGGAATTAACAAAGGGAAAACTGATATCTTCATTGAAAACCTCCCTGGTGGACCTGACAATATCAACCTTGCTCCTGATGGCTCATTTTGGATCGCTTTGGTTAAAATAACTTCTGAAAGGCTCAGTTTTTTGCACAAGTCTAAGGTATGCAAGCACTTGTTAGCTTCATTTCCAAGGCTATTTAATCTGATCAATAGTGCAAAAAAGTCAGCATCGGTGGTAAATGTTGGAACTGATGGTAAGATTATCAAAAAGTTTGACGATAACGAAGGGAAGGTCATTCGTTTTGTAACTTCGGCTGTGGAATTTGAGGACCATCTTTACTTAGGCAGTCTTCATTCCGACTTTGTCGGAAAATTACCACTGTGA 1080 0.3704 MASTVGCVTLTSSLVLAILFALTVQVFYFSPIDPLLLEIPPAVFSISSTKNNKLQNVIKLGEGFMKQPEDVCVDKDGVLYTATRDGWIKRMVRNGKWENWKHIDSSTLLGITTSKDGGLIVCDASLGLLKVTEDGFSVILSQVNGSQLILADDVIEASDGNIYFSVASTKFNLHNWHLDLLEARPHGQLLKYNPISNETAIVLDDLFFANGVALSKDEDYLVVCETWKFRCLKLWLKGINKGKTDIFIENLPGGPDNINLAPDGSFWIALVKITSERLSFLHKSKVCKHLLASFPRLFNLINSAKKSASVVNVGTDGKIIKKFDDNEGKVIRFVTSAVEFEDHLYLGSLHSDFVGKLPL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02601 359 Pfam Strictosidine synthase-like, N-terminal 50 91 - -
Trre3g02601 359 Pfam Strictosidine synthase 156 238 IPR018119 GO:0009058|GO:0016844
Trre3g02601 359 FunFam ABC transporter permease protein 53 359 - -
Trre3g02601 359 PANTHER STRICTOSIDINE SYNTHASE-RELATED 19 349 - -
Trre3g02601 359 SUPERFAMILY Calcium-dependent phosphotriesterase 37 357 - -
Trre3g02601 359 Gene3D - 49 358 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02601 Trre-Chr3 26257987 26264512 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02601 - - mtr:11443676 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02601 3 26257987 26264512 Trre3g02601 3 26257987 26264512 ECH