Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02589 ATGGGTTCTGAGAGCAACAACTTGGAATTTCTTAAAGAGATCGGTTTAGGTTCAATTAACATCGGTTCTTTCATCAATGGCCAATGGAAAGCCAACGGTTCTTCTGTTACTTCTGTCAATCCTTCTACAAATCAGACTATTGCTACGGTGACTGAAGCAACTGTGGAAGATTATGAAGAGGGATTGCAAGCTTGCAGTGAAGCAGCTAAGACATGGATGACTGTTCCTGCACCAAAAAGAGGTGAGATTGTAAGACAGATTGGAGATGCGTTGAGGGCTAAATTGGATCCTCTCGGTAGGTTGGTGTCTCTTGAGATGGGAAAAATTCTTGCAGAAGGAATTGGGGAAGTTCAGGAAATTATTGATATGTGTGATTATGCTGTTGGGCTAAGCCGACAATTGAATGGATCAATTATCCCATCAGAACGTCCAGATCATATGATGTTTGAGGTATGGAACCCACTAGGAATTGTTGGTGTAATCACCGCTTTCAACTTTCCATGTGCTGTTCTAGGGTGGAATGCTTGCATCGCACTAGTCTGTGGTAATTGTGTTGTTTGGAAAGGTGCTCCAACTACTCCATTGATAACTATTGCTGTGACAAAGCTAATATCTGAAGTTCTTGAGAAGAACAAATTACCCGGGGCAATATTCACATCTTTCTGTGGAGGTGCTGATATTGGGGAGGCAATATCAAAAGACACACGAATTCCATTGGTTTCATTTACCGGTAGCTCAAAGGTGGGCTCGATAGTCCAGAAAACAGTGAATGAAAGATTTGGCAAATGCTTACTCGAGCTAAGTGGTAACAATGCCATAATAGTCATGGATGACGCAGATATCAAACTAGCTGTACGCTCTATTTTCTTTGCAGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCCGTAGACTGTTTGTACATGAGAGTATTTACACAAATGTACTAGATCAACTTGCCGGACTCTACAAACAAGTCAAGATTGGGAATCCCCTGGAGAAAGGGACTCTAGTTGGGCCTCTGCATACACGTTCTTCTGTGGAAAACTTCAAGAAGGGCATTGCGGCAATAAAATCTCAGGGAGGGAAGATCCTAACAGGGGGATCTGTATTAGAGTCGGAAGGAAACTTTGTTCAGCCAACAATTGTCGAGATTTCTTCAGATGCTGCTGTAGTTAAAGAAGAACTATTCGGTCCAGTTCTCTATGTTATGAAATTTCAGAATCTTGAAGAAGCAATTGCCTTGAACAATTCCGTGCCTCAAGGATTGAGTAGTTCAATCTTTACACAAACACCTAATACTATATTCAAATGGATCGGGCCAAGAGGGAGTGATTGTGGTATAGTAAATGTAAACATACCAACTAATGGAGCTGAGATTGGAGGTGCATTTGGTGGAGAAAAGGCAACCGGTGGTGGCCGCGAAGCAGGAAGTGACTCGTGGAAGCAATACATGCGCCGTTCTACATGTACCATCAATTATGGAAGTGAACTACCATTAGCTCAGGGAATTAACTTTGGTTAA 1527 0.4257 MGSESNNLEFLKEIGLGSINIGSFINGQWKANGSSVTSVNPSTNQTIATVTEATVEDYEEGLQACSEAAKTWMTVPAPKRGEIVRQIGDALRAKLDPLGRLVSLEMGKILAEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLISEVLEKNKLPGAIFTSFCGGADIGEAISKDTRIPLVSFTGSSKVGSIVQKTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSIFFAAVGTAGQRCTTCRRLFVHESIYTNVLDQLAGLYKQVKIGNPLEKGTLVGPLHTRSSVENFKKGIAAIKSQGGKILTGGSVLESEGNFVQPTIVEISSDAAVVKEELFGPVLYVMKFQNLEEAIALNNSVPQGLSSSIFTQTPNTIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02589 508 CDD ALDH_F7_AASADH 26 496 - -
Trre3g02589 508 Pfam Aldehyde dehydrogenase family 32 488 IPR015590 GO:0016491
Trre3g02589 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
Trre3g02589 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 4 508 IPR044638 GO:0004029
Trre3g02589 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Trre3g02589 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 485 IPR016162 GO:0016491
Trre3g02589 508 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 269 460 - -
Trre3g02589 508 SUPERFAMILY ALDH-like 19 497 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02589 Trre-Chr3 26100882 26107458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02589 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 80.709 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02589 K14085 - gmx:100811186 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02589 3 26100882 26107458 Trre3g02589 3 26100882 26107458 ECH