Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02515 ATGGTAGCTATGGCAGCTAATAAGAGAATCGAAACCTTCGAAGATTTCGTTAAAGTTCACGGAATTTTACTCGCCGCGTCGGGGTTGCCGGAGTCACTTCACCGCCGTCTCTTCCAGAAACTCTCCACTGAAACTTTTGACGGCGGCGAACATTTCCAGATCGAGCCTTGTGAAGATAACCGCATGAGACGCCTCGTTTTGACGTCGGATTCTATGGCGAAAGACTCTAATGTCTTCCTCATTGATCATGCTTGGACTTTCAGACTCTCCGACGCTTACAAACAGCTGCGTGAAGTTCCAGGATTAGCAGAGAGGATGAGTTCATTGATGTGTGTGGATATTGACACAAATTTGGATGGTGAAAATGAGGTGAATGATGTTGATGATGAAGTTTCGAGAGAGAAGCTCGGTGTTGTGGAAATAGTGGAGAATGAGGTTTTAGAGGCAAAAGAGAAAAGTGATGGTACATTGAAATGGTTGGAGCTTGATGATCTTGACATTGATGATGATATGTTTCTCTCATTGGACTTACCTGCTAGATTTCCGAATTTAGTGGCACTTAGCCTATATGGAAACAAGCTTACAAGAGTGGAACTGGTTGTTCAAGAAGTTTCCAAATTTAAACATCTCAAAGGACTCTGGCTGAACAATAATCCGGTTCTTAAAAATTGTGATGGTGAGCTTGCAGATTTTTTTCTCAAGGAATTACCAGGACTGGAGATTTATAATTCAACTTTCACAAGCAATTATGGGGAGTGGGCTTTGGGCTTTTGTGCAGATATATATGGAAAGGATAACCCAACAAATGCTGATCAAGCTGACAGTCCACTGTTGAGTGTATCTAATCTTGACCTTTCAAATAGAAACGTTCACAATTTGATCAACAAGGAATTTTCACCCAGTTGTTTGCCATCTCTTTCTTGCTTGAACATTCGTGGAAATCCATTGGAGCAAAACTCAGTTTCCGACTTGTTAGATCTGCTGAGTCGATTCCCTTCCTTACGTTCATTGGAGGTCGATATTCCTGGTCCTCTTGGAGGAAGTGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAAATAAATGGTATTTCTGCATCCAAAATATTGGAAACCGGAAAGCATGTTATTGATTCGGTGCTTCTTCCTCGTGTTCCTGAATGGAATCCTGATGAGCCTATCCATGACCGTATTATAAGTGCAATGTGGCTATATCTAATGACATATAGACTTGCTGATGAAGAAAAGTTAGACGAAACCTCTGTATGGTATGTGATGGATGAATTTGGTTCTGCTTTGCGGCATAGTGATGAGCTAAATTTTAGAGTGGCGCCTTTTCTTTTCATGCCGGAGGGTAATCTGGCCTCAGCTGTGAGCTTTTCTATTCTATGGCCAACTCGGAATGTTTGGAAAGGCGATGAGTGCACCCGTGACTATCTTCTTGGTATTGGGGAAGATAAACAGCGTTCTTCCAGACTTACTGCCTGGTTCCATACCCCAGAGAACTATTTTATCCAAGAGTATGAGAAGCACAATCAGAAATTGCAATCCACAAGTTTAATACCACCCACTGTGCAGTCTTCTGAGAGTAGAAGTATTCGTCCACATGATGGGCGTCCTTTACGGGTTTACACAGATATACCTCACGTGGAAGAGAACTTGACTCATCCTGAGTTTGCAATCATAAAGGACCCAAAGGATGCAGATATAATATGGACATGTGTGCAGGTAGATGAGGAGATGAAAAAGGCCACAGGAATAACAGATCAGCAATACATTAATCAATTTCCATTTGAGGCCTGTCTTGTCATGAAACATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACTCATCTGTCTCAACTTATTGGTGATTATTATTTACGCAAAAGAGAAGGACTAGACAACCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACTATTGATACTGCGGTAATTGATAATTTGCCAGCCATAATCCGACTCATGGAAACTGGTCCAAAAATATGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAAGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCACCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCTAACAACCAATATTCTTTGGCCAAAAGTAGTCTCTTTGAGTATGAAACTCATTTCACTGTTATGAATTATCGTGGAAAAATAAACCACAAGAATATCAAGGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACATACGAGAGTAAGGAATATGATTCGATCAGTGTTTGAGGCAGCTGCAGTTGCACATCCTGAGATGCATAGTCCAACATCAAGGGCAATGTATGGTGTAGATGTCATGTTAGACAGCTCTTTCCAACCTAAGTTACTAGAGGTGACTTACTGCCCTGATTGTACGCGAGCTTGCAAATATGACATGGATATTGTTGTCGGAGAAGGAGGTGTTGCCAAAGGTAGTGATTTCTTCAACAATGTGTTCAAGTGTCTCTTTTTGAATGAAATTTCTCAGGTTAGTCCATTGTAA 2622 0.4108 MVAMAANKRIETFEDFVKVHGILLAASGLPESLHRRLFQKLSTETFDGGEHFQIEPCEDNRMRRLVLTSDSMAKDSNVFLIDHAWTFRLSDAYKQLREVPGLAERMSSLMCVDIDTNLDGENEVNDVDDEVSREKLGVVEIVENEVLEAKEKSDGTLKWLELDDLDIDDDMFLSLDLPARFPNLVALSLYGNKLTRVELVVQEVSKFKHLKGLWLNNNPVLKNCDGELADFFLKELPGLEIYNSTFTSNYGEWALGFCADIYGKDNPTNADQADSPLLSVSNLDLSNRNVHNLINKEFSPSCLPSLSCLNIRGNPLEQNSVSDLLDLLSRFPSLRSLEVDIPGPLGGSAIEILESLPNISEINGISASKILETGKHVIDSVLLPRVPEWNPDEPIHDRIISAMWLYLMTYRLADEEKLDETSVWYVMDEFGSALRHSDELNFRVAPFLFMPEGNLASAVSFSILWPTRNVWKGDECTRDYLLGIGEDKQRSSRLTAWFHTPENYFIQEYEKHNQKLQSTSLIPPTVQSSESRSIRPHDGRPLRVYTDIPHVEENLTHPEFAIIKDPKDADIIWTCVQVDEEMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYYLRKREGLDNLWILKPWNMARTIDTAVIDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLAKSSLFEYETHFTVMNYRGKINHKNIKDFVREFEEEHQVKWLDIHTRVRNMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGSDFFNNVFKCLFLNEISQVSPL 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02515 873 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 649 830 - -
Trre3g02515 873 ProSiteProfiles TTL domain profile. 537 865 IPR004344 GO:0036211
Trre3g02515 873 Pfam Tubulin-tyrosine ligase family 591 841 IPR004344 GO:0036211
Trre3g02515 873 Gene3D Ribonuclease Inhibitor 258 369 IPR032675 -
Trre3g02515 873 Gene3D Ribonuclease Inhibitor 102 250 IPR032675 -
Trre3g02515 873 Gene3D - 668 846 - -
Trre3g02515 873 SUPERFAMILY RNI-like 156 363 - -
Trre3g02515 873 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 4 872 IPR027749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02515 Trre-Chr3 24998819 25006319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02515 K16609 - gmx:100809212 1448.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02515 3 24998819 25006319 Trre3g02515 3 24998819 25006319 ECH