Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02508 ATGTCTCCACGCACTAAACCCACTCAATCAACGGAATCTCCTTCCCTTTCTCCTCCCGTTCCGCCGCGGCGTCGTAGTCTCCGTCTCGCTTCCATTTCCAACTCCGAACCTCCTCAATCAACAACCGTAACTACCCCCGAACCACCAACCGCTAGGGTTTCCGAACCAAAAATGGAAATATCAATCCTAACCGCTTCGGGATTGGAATCCGAACCTATTCTTAACTTGCGATCGGGAAAGAAAGTTCTCAAACGCGGAATCACTATCACAAAAGAAGATGATGATTCTGAAAATAATGCTTCTAAAAGGAACAAAAAAGATGATGAAAATCGAAGTGAAGTGAAGAATGTTGAAGGTGAATCGAGTCGAAGGAGAATATTAACTAGAGAGGAGAAAGGAAAGGAAAAGGAAAATGAAATTGAAAAAGAAGAGGAAACCGTTGTTGATGATGAAAGTGTTGAATTAGACGTGGAATTGGAAGTTGAGAACAATAAGGAAGATGAGAATGTTCTAGAACAAGTTAGAAATGGTAACAATAATGCTAGAGAGGAACGTGGTGTTGATGTGGATTTGGAAATTGAGAACAATATGGAAGCGGTGAATGAAGAAGTGAATGTTCTAGAACAAGTTAGAAACGCTAACAACAATGCTAGAGAGGAGCGTGGTGTGAGGAGGAACATGGAACGATTCCGTAATATAGCAAGAGAAAACGCAACTCGTTTTGCGCTTTTTGCTGATGATGAAAACGATGGTGGTGATTTGTCTCCGGAAAATGAACAGGAGAAGAATGAGATGGAAGACTGGCCTGGTCCTTTTTCAACTGCTATGAAAATCATCAGGGATAGAGAAAAGAATGGAATTCAATTCGGTTATGTGGTTACACAAAAGAATTTGGTTGATTTGATAAAGTGGAAACCGAAATCAAAGGAGGAGAAGTTAGGTGGGAAGTTAACGGTTCCATCTTTGCAAGAACTTTGTATTCGGATACTTGCTAAGAATGTTGATGCGATTGTTTCGCTTGAGGGTGTGCCTGATGCTTTGAGGCATAGGCTTACTCAGTTGCTGTGTGATTCGAGAAGAATGAATGATCATTTCTTTGAACTTCTTGTTGGTGGAACTCCCACAGAGATTCGGGTTAGAGATTGCTCGTGGTTGTCGGAGGAACAATTTACCAAGTGCTTTCAAGCAAGTGATACTTCTAAGTTGGTGGTACTGCAACTTGACCAGTGTGGGCGCTGTTTGCCGGATTTTGTGGTAGTTTCTACTTTGGCAAGGTCACCAAAGCAGTTACCTGTGTTAACTAGTCTATCCCTTGGTGGTGGATGCCGGCTCTCAGATGGCGGGTTGCGTTCACTTGTTTCTTCTACTCCAATGCTTAGATCAATAAACCTTAGCCAGTGCTCCCTTCTCACATCTGCTAGTCTTTTTAGTTTGGCTGAGTCATTAAAATCTCTTTTAAAAGAGTTGTACCTTGATAATTGCTTTGGCATTGATGCTGCACTAATTGTGCCAGCGCTGTTGGAATTCGAACATTTAGAAGTATTGTCAGTCGCTGGCATCCCAACTATTTGTGATGCATTTGTCAAGGATTACATTGTTGCACGTGGGCACAACATGAAAGAGCTTATTCTCAAGGACTGCATAAACTTGACTGATGCATCAATCAAAGTTATTGCTGAACACTGTCCTGGAATATGTGGGCTTGATCTTTCGAACGTGTGCAAATTAACAGATCTGTCCATGGGATATCTTACAAATGGTTGTCGTGCACTTCAAACACTGAAGCTTTGCCGTAACCCATTCAGTGATGAAGCAATTGCTGCATATTTGGAGACTAATGGAGAGTCCTTGATAGAACTATCGCTTAATAACATCAAAAAGGTTGGTTACCACACAACCTTATCACTTGCAAGCAATGCAAAAAAATTGCATAGTCTAGATCTATCTTGGTGCCGAAATTTGACTGACAATGCATTGGGTTTGATAGTGGATAGTTGCCTGTCGCTGAGATTACTTAAACTCTTCGGATGCACTCAGGTAACGGATGTTTTTCTGAATGGCCACTCAAACTCGCAGATCCAGTTAATTGGTATAAAAATGACTTCTGTTTTGCAACATGTGAAAGTGCCGGATCCTAATCGAAGTACTTTGAATTATTCATCGGTCTCAGTAGAGCTGGCTCCGTAG 2187 0.4166 MSPRTKPTQSTESPSLSPPVPPRRRSLRLASISNSEPPQSTTVTTPEPPTARVSEPKMEISILTASGLESEPILNLRSGKKVLKRGITITKEDDDSENNASKRNKKDDENRSEVKNVEGESSRRRILTREEKGKEKENEIEKEEETVVDDESVELDVELEVENNKEDENVLEQVRNGNNNAREERGVDVDLEIENNMEAVNEEVNVLEQVRNANNNAREERGVRRNMERFRNIARENATRFALFADDENDGGDLSPENEQEKNEMEDWPGPFSTAMKIIRDREKNGIQFGYVVTQKNLVDLIKWKPKSKEEKLGGKLTVPSLQELCIRILAKNVDAIVSLEGVPDALRHRLTQLLCDSRRMNDHFFELLVGGTPTEIRVRDCSWLSEEQFTKCFQASDTSKLVVLQLDQCGRCLPDFVVVSTLARSPKQLPVLTSLSLGGGCRLSDGGLRSLVSSTPMLRSINLSQCSLLTSASLFSLAESLKSLLKELYLDNCFGIDAALIVPALLEFEHLEVLSVAGIPTICDAFVKDYIVARGHNMKELILKDCINLTDASIKVIAEHCPGICGLDLSNVCKLTDLSMGYLTNGCRALQTLKLCRNPFSDEAIAAYLETNGESLIELSLNNIKKVGYHTTLSLASNAKKLHSLDLSWCRNLTDNALGLIVDSCLSLRLLKLFGCTQVTDVFLNGHSNSQIQLIGIKMTSVLQHVKVPDPNRSTLNYSSVSVELAP 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02508 728 Gene3D Ribonuclease Inhibitor 315 498 IPR032675 -
Trre3g02508 728 FunFam RNI-like superfamily protein 313 530 - -
Trre3g02508 728 PANTHER UNCHARACTERIZED 320 499 - -
Trre3g02508 728 MobiDBLite consensus disorder prediction 246 270 - -
Trre3g02508 728 Coils Coil 164 184 - -
Trre3g02508 728 SMART LRR_CC_2 640 665 IPR006553 -
Trre3g02508 728 SMART LRR_CC_2 456 481 IPR006553 -
Trre3g02508 728 SMART LRR_CC_2 562 587 IPR006553 -
Trre3g02508 728 SMART LRR_CC_2 666 691 IPR006553 -
Trre3g02508 728 SMART LRR_CC_2 430 455 IPR006553 -
Trre3g02508 728 SMART LRR_CC_2 588 612 IPR006553 -
Trre3g02508 728 SMART LRR_CC_2 536 561 IPR006553 -
Trre3g02508 728 Coils Coil 200 220 - -
Trre3g02508 728 Gene3D Ribonuclease Inhibitor 499 709 IPR032675 -
Trre3g02508 728 MobiDBLite consensus disorder prediction 1 146 - -
Trre3g02508 728 MobiDBLite consensus disorder prediction 85 141 - -
Trre3g02508 728 MobiDBLite consensus disorder prediction 28 49 - -
Trre3g02508 728 SUPERFAMILY RNI-like 398 689 - -
Trre3g02508 728 FunFam DNA repair protein rhp7 isoform A 616 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02508 Trre-Chr3 24809265 24814290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02508 K15082 - gmx:100808150 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02508 3 24809265 24814290 Trre3g02508 3 24809265 24814290 ECH