Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02457 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAGCTTCTACGGGAAAACAAGAGAATGTTGGACAAATCAATTAGGGAAATTGAGCGGGAGAGGCAAGGTTTACAAACTCAAGAGAAGAAATTGATTGCGGAGATAAAGAAAAGTGCTAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAAAGATCTTGTTCGAACAAGGCATCAGATTGAAAAGTTTTACAAGCTAAAATCACAGCTGCAAGGTGTATCACTTAGAATTCAGACATTGAAATCAACACAAGCAATGGGTGAGGCAATGAAAGGTGTGACAAAGGCCATGGGCCAGATGAATAGGCAAATGAATTTGCCAAATTTGCAAAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGACGATGGAAGTGATGGGAGACGCAGTAGACGATGCTTTGGAAGGGGATGAAGAAGAGGAAGAAACAGACGATCTTGTGAACCAAGTTCTTGATGAGATTGGTATTGACATAAACCAAGAGCTTGTAAATGCACCATCATCGGCTGTTGCTGCCCCGGCCGCAAAGACTAAGGTACCTCAAGCTGAAACTGCTGCAACCGATGATGGCGGGATAGATAGTGATTTACAGGCAAGATTAGACAACTTAAGAAAAATGTAG 672 0.4196 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPNLQKIMQEFERQNEKMELTMEVMGDAVDDALEGDEEEEETDDLVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQAETAATDDGGIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02457 223 Gene3D - 6 181 - -
Trre3g02457 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Trre3g02457 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 221 IPR005024 GO:0007034
Trre3g02457 223 MobiDBLite consensus disorder prediction 185 211 - -
Trre3g02457 223 Coils Coil 12 46 - -
Trre3g02457 223 Coils Coil 119 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02457 Trre-Chr3 23600265 23604661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02457 K12191 - gmx:100526885 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02457 3 23600265 23604661 Trre3g02457 3 23600265 23604661 ECH