Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02423 ATGGCAGCATCCACCAAGTTTGACGTATCTTCCACCAGCCCAGATAGACCTTTGTACACTGGGCAGCGAGGATCCCACATAGCTACTTCATTAGATAGATCAGGCAGCTTTCGTGAAAGCTTAGAAAATCCAATTTTGTCTTCCCTTCCAAACATGTCAAGAAGCAGTTCTTCAGCAACACAAGGGGATGTAAATAGCTTCTTCAGTTGTGTGCGTTTTGATCCAAAGTTGGTTGCTTTAGATCATAAGTCTAATCGTCCAATGGATTATAAACGACATGTCAGTGCTGCTCTTGGAATTTCACCAGATGAATCTCCTTCTAGTTATGCAAAAGGAAAGCAATTGACATCCCCAGTACCAGAAGATATCAAAAGAATCAGGGAGGGTTTAAATGCAAACTTTAGGAGGGCAAGGGATCGTGCTAAAATGTTCAGTGAAGCCTTATCGAGATTCAACAAAGATTTCCCAAATATAACTTCAAAGAAGAGATCTCGAGCAGACAATTTTTCTACTGACCGTTCTAGTTTTACATCAAGTGATCGGTCAGTCTTGGGCCCAAGCATAGGTAAGGTTGGAGTTCATGGTCATGCAGTCGTAGGTAGTTTTGAACATGATCAGCAAAAGTTGGAAGAAAGAACCAAAACTGGTGTTCCAAACAAGCGCACTAGAACTTCTTTGGTTGATGTCAAGATGGATGTGCGGACTAACTCGCTCGTCAGGTCATCTGGGACTGTTGATAGAGAGAAGGATATCCTTCGAATTGCTAATAATGGTACAGTTCAGGGTGAGGAACGAACTTTTCCCATTGGAGGTGATGGTTGGGAAAAGTCTAAAACAAAGAAGAAGCGTTCTGTCATCAAACCAGATGGGTCTCCAAGTACAACATCGGCGAGACCTGTTAACATTTTCCAGGAAACTAAGCAAGGAATGCAACAAAGACTAGCTACTGATGCTCGGTCAAAATTGAGTAACGATTCTCATTCTTACAGGTCGTCTCTTTCTAATGGAACTGCTGGAGCTGGAAAATCAGATGGCATGTCTCACCAAGCTGGGTTGGGCACACGTGTCTCTACTCCTAGAAATGACACAGATAGCAATTCTACTGTCAATGATAGGCGGGATCGTCCTGTTAATTCAGACAAGGAAAGGATGAATTTCAGAGCCGCTAACAAGGAAACTGTCCGTGATGAATTTAATTCAACCAGCCCCAATTCAAGTGCAAAATTGAATGCATCTATTCGGGCACCACGGTCAGGTTCAGGAGTGGCTTCCAAGTTGTCACCAGTCGTCCACAGAGCAACTGTTCCTAATGATTGGGAACTATCTCATTGTACCACTACCACCAAGCCGCCTGCTGGTGTTGGCACAAACAATCGCAAACGTGCAGCATCTGCGCGGTCATCTTCTCCACCTGTTGCCTCTTGGCAGAAACCACAAAAGAACTCCCGCACTGCCAGAAGAACAAATTTTGTTCCTGTTGTTTCAAGTAATGATGACTCCCCTGCTTTGGATTCTGTATCTGATGCGTCTGGCAGTGATCTTGGGGTAGGATTTCCCAAACGTTTGTCTGGCAGTTCTCCCCAGCAAATAAGATTAAAAGGTGATCCATCATCTTCAGCTGCCTTATCTGAAAGCGAAGAGTCTGGGGTGGCTGAGATGAAACCTAAAGAGAAGGGCAGGAAACCGGATGAGATGGACCAGAAAGCTGTACAAAATGTTCAAAAGGTTTCTAACATGGTCCCTCCAATGAAAAAAAACAAGCTTGTATCCAGGGAAGAACATGGAGACAGTGTTCGTAGGCAAGGAAGGACAGGGCGGAATTTTCCTGCTACAAGGTCATTGGTGCCATTGACATCTGAGAAGCCTGGAAACATAGGGACTGTAAAGCAACTCAGAAGTTCAAGACTAGGATTTGAGAAGAGTGAAAGCAAGGCAGGTCGTCCACCAACCAGGAAACTTTCTGATAGGAAGGCATATGCTCGCCAAAAGCACTCAGCTATTAGTGCATCAGCAGATTTCCTTGTTGGGCCAGAAGATGGACATGAAGAGCTATTGGCTGCTGTGAAGGGTCTTATCAACTCTGGTCGTGCTTTTTCTAGCCCATTTTGGAAGCAGATGGAGCCTTTCTTTGGTTTGATAATTGAGGAGGATGTTGCTTACTGGAAACAAAAGATAAATCTTGAGTCAAGCGGATTTATGCCAACTCCAGTTTCTTCAAATAGAGATGATTGTGAAGCTGTTGCTAATGGGTATGGGTTGATGGTTTGCGGAAGCGATACGGGACCTGATGCTCAAAGGGGTGCTGGAGCTAAAAGGGATTGTAATGTAATTCCCCTTTGTCAAAGGCTGCTATCTGCTTTAATTTCAGAGGAGGGTTGCAGTGGAAGTGAAAATCTCAACTTTGATGCGTATGATACTCAATTTGAGATAGATGGGGAGTTGGAACTGGACCATTTGGATAACCACTCACCAGCTAATTATAACTTCCCTAGTCATTCTGCTTGCAATGGTTATAGGACAACTCAGATGCCGGAACATGATGATACTACAAGTGATTTATTTGATATTCCATCCAATGGGTTGCAGTCAAGCCAGAAGATTTCAGAGTTGGAATATGAATCCTTGGATATGGAGGACAAACTTCTCTTGGAGCTTCAAAGCATTGGAATTTCCCCTGAACCCATGCCTGAAATATCGCAAACAGATGATGGAGTTTGGGACGAAATCACCAGGTTAGAGGAGCATTATCAAAGACAGATTTCCAAGAAGAAAGGCTTGCTAGAAGGGTTATTGGAATCTGCCTCAGTGACCAAAGAATGTCACGAAAAGGATTTTGAACTACGCGCTCTAGACAAACTTGTTGTGATGGCTTATGAGAAATACATGGCTTGTTGGGGTCGTAATCCCTCAGGTGGGAGAAATACAAGCAGCAAAGTGGCCAAGCAAGCTGCATTGGGATTTGTTAAACGAACATTGGAGCGATACCATCAATTTGAAGATACAGGCAAGAGCTGCTTCAACGAGCCTTTATTCAAGGATATGTTCTTTGCTGCTTCTTCCCAGCTGAGTATTGTTCGTCTAGTAGATGTCATGGAGGCTGAATCTACAAAATCACATGCTTCTACCCTTTCTCTGGAAGCAAGAACAGGTTCCATTAGTTCACGGAAGAGCCACTCCCAATTTAGTCCAAACATGAATAATCACGATGTCAATTTATCAGATATTTTCCCTGTTATAAATAATTCATTTGAACAAACTAGTGGGAAGGAAGATCTGTGGTCAAACAGGGGGAAGAAAAGGGAATTGTCCCTTGATGACGTTGGTGCTTCAAGTGTTCCGTCGGGCATTAGAGGTTCTCTATCAAGCAGCACAAAAGGAAAGAGAAGTGAAAGAGATGGAAAAGGGCAGAGCAGAGAAGGGATATCCAGAAACGGAACTACCAAAGCCGGTAGGCCAGCATTATCTAATACTAAAGGAGAAAGGAAACCCAAATCAAAGCCTAAGCAAAAAGCAGCTCAGCATTCTGTTTCTGTTAATTGCCTCGTTGGCAAACTATCAGACCAACCTAAACCAGCATTGCCATCTGTTTCAAAATCAAATGAATTGCCTACCAATAGCAATGCCAAAGAAAAGAAGGAGTGTGGCGTCGCTGAAGATGAACACGAGCCTATAGATTTGTCCAACCTGCAACTACCTGGAATGGATGTACTTGATGATCAAGGTCAGGATATTGGTTCGTGGTTGAATATTGATGATGACGGATTGCAAGATGATTTTATGGGTGGCCTTGAAATTCCGATGGATGACCTTTCAGACTTGAACATGATGGTTTAA 3834 0.4343 MAASTKFDVSSTSPDRPLYTGQRGSHIATSLDRSGSFRESLENPILSSLPNMSRSSSSATQGDVNSFFSCVRFDPKLVALDHKSNRPMDYKRHVSAALGISPDESPSSYAKGKQLTSPVPEDIKRIREGLNANFRRARDRAKMFSEALSRFNKDFPNITSKKRSRADNFSTDRSSFTSSDRSVLGPSIGKVGVHGHAVVGSFEHDQQKLEERTKTGVPNKRTRTSLVDVKMDVRTNSLVRSSGTVDREKDILRIANNGTVQGEERTFPIGGDGWEKSKTKKKRSVIKPDGSPSTTSARPVNIFQETKQGMQQRLATDARSKLSNDSHSYRSSLSNGTAGAGKSDGMSHQAGLGTRVSTPRNDTDSNSTVNDRRDRPVNSDKERMNFRAANKETVRDEFNSTSPNSSAKLNASIRAPRSGSGVASKLSPVVHRATVPNDWELSHCTTTTKPPAGVGTNNRKRAASARSSSPPVASWQKPQKNSRTARRTNFVPVVSSNDDSPALDSVSDASGSDLGVGFPKRLSGSSPQQIRLKGDPSSSAALSESEESGVAEMKPKEKGRKPDEMDQKAVQNVQKVSNMVPPMKKNKLVSREEHGDSVRRQGRTGRNFPATRSLVPLTSEKPGNIGTVKQLRSSRLGFEKSESKAGRPPTRKLSDRKAYARQKHSAISASADFLVGPEDGHEELLAAVKGLINSGRAFSSPFWKQMEPFFGLIIEEDVAYWKQKINLESSGFMPTPVSSNRDDCEAVANGYGLMVCGSDTGPDAQRGAGAKRDCNVIPLCQRLLSALISEEGCSGSENLNFDAYDTQFEIDGELELDHLDNHSPANYNFPSHSACNGYRTTQMPEHDDTTSDLFDIPSNGLQSSQKISELEYESLDMEDKLLLELQSIGISPEPMPEISQTDDGVWDEITRLEEHYQRQISKKKGLLEGLLESASVTKECHEKDFELRALDKLVVMAYEKYMACWGRNPSGGRNTSSKVAKQAALGFVKRTLERYHQFEDTGKSCFNEPLFKDMFFAASSQLSIVRLVDVMEAESTKSHASTLSLEARTGSISSRKSHSQFSPNMNNHDVNLSDIFPVINNSFEQTSGKEDLWSNRGKKRELSLDDVGASSVPSGIRGSLSSSTKGKRSERDGKGQSREGISRNGTTKAGRPALSNTKGERKPKSKPKQKAAQHSVSVNCLVGKLSDQPKPALPSVSKSNELPTNSNAKEKKECGVAEDEHEPIDLSNLQLPGMDVLDDQGQDIGSWLNIDDDGLQDDFMGGLEIPMDDLSDLNMMV 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02423 1277 MobiDBLite consensus disorder prediction 586 601 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 366 394 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 269 287 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 1139 1153 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 395 413 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 1 39 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 441 507 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 604 631 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 522 545 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 1124 1138 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 350 365 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 441 655 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 262 427 - -
Trre3g02423 1277 PANTHER OS05G0107300 PROTEIN 1 1277 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 1099 1210 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 1039 1066 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 549 568 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 160 182 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 635 655 - -
Trre3g02423 1277 MobiDBLite consensus disorder prediction 288 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02423 Trre-Chr3 23239699 23249629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02423 - - gmx:100812435 1774.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02423 3 23239699 23249629 Trre3g02423 3 23239699 23249629 ECH
Trre15g05165 15 61224480 61233204 Trre3g02423 3 23239699 23249629 PCT