Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02411 ATGTCTGTAACAAAACAACACAATTTCTGGGAAACACAACCAGTTGGTCAATACAAAGATGTTGGTGACAAATCTTTACCAGAAGGACCAATTGAACCACCAACACCTTTATCAGAAGTGAAACAAGAACCTTATAATTTACCAAATGCTTATGAATGGACAACATGTGACATGAGTTTTGAAGAAACATGTGATGAGGTTTATCTTCTTTTAAAGAATAATTATGTTGAAGATGATGAAAATATGTTTAGGTTTAATTATTCTAAGGAGTTTCTAACATGGGCTTTATGTGTTCCTGGTTATTATAAGAATTGGCATATTGGGGTTCGAGCGAAAGTTTCGAAGAAATTAGTTGCTTTTATAACTGGTATTCCTGCTAGAATAAGGGTTAATGATAATGTTGTGAAAATGGCTGAGATTAATTTTTTATGTGTTCATAAGAAACTTAGATCGAAAAGACTTGCGCCGGTTATGATTAAGGAAGTTACTAGGAGGGTTCATTTGGAAACTATTTGGCAAGCGGCTTATACTGCCGGGGTTGTTATTCCAACCCCGGTTGCTACTTGTCAGTATTGGCATAGGTCGTTGAATCCGAAGAAGCTTATTGATGTTGGGTTTTCGAGGCTTGGTGCTAGGATGACTATGAATAGGACTATTAAGCTTTATAAGTTGCCTGATTCGACGATTACTAGTGGGTTTAGGAAAATGGAGTTGAGGGATGTTCCGGCGGTTACAAGGTTGCTTAGGAATTACTTGAGACAGTTTGTTGTTGCGCCTGATTTAGATGAAAATGATGTTGAGCATTGGCTTCTTCCGCATGAGGATGTTGTCGATAGTTACTTGGTTGAGAGTCCTGAAAATCATGAGATTACTGATTTTTGTAGCTTTTACACATTACCTTCTTCAATCCTTGGAAATCAGAGTTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTGGCTACTAAAACTCCACTGGCTCAGTTGATGAACGATGCGCTGATTGTGGCAAAGCAGAAGGATTTCGATGTTTTCAATGCATTGGATGTAATGCATAATGATGGTTTCCTTAAAGATCTCAAGTTTGGACCTGGACCTGGAGATGGACAACTTCACTACTACTTGTACAATTATAGGATTCGTAATGCCATGAAACCATCTGAACTTGGTCTTGTTCTCTTGTAG 1188 0.3746 MSVTKQHNFWETQPVGQYKDVGDKSLPEGPIEPPTPLSEVKQEPYNLPNAYEWTTCDMSFEETCDEVYLLLKNNYVEDDENMFRFNYSKEFLTWALCVPGYYKNWHIGVRAKVSKKLVAFITGIPARIRVNDNVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLETIWQAAYTAGVVIPTPVATCQYWHRSLNPKKLIDVGFSRLGARMTMNRTIKLYKLPDSTITSGFRKMELRDVPAVTRLLRNYLRQFVVAPDLDENDVEHWLLPHEDVVDSYLVESPENHEITDFCSFYTLPSSILGNQSYSILKAAYSYYNVATKTPLAQLMNDALIVAKQKDFDVFNALDVMHNDGFLKDLKFGPGPGDGQLHYYLYNYRIRNAMKPSELGLVLL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02411 395 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 139 147 IPR022678 GO:0004379
Trre3g02411 395 MobiDBLite consensus disorder prediction 17 42 - -
Trre3g02411 395 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 191 395 IPR016181 -
Trre3g02411 395 Gene3D - 2 395 - -
Trre3g02411 395 PANTHER N-MYRISTOYL TRANSFERASE 4 395 IPR000903 GO:0004379|GO:0006499
Trre3g02411 395 FunFam Glycylpeptide N-tetradecanoyltransferase 1 395 - -
Trre3g02411 395 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 30 189 IPR022676 GO:0004379
Trre3g02411 395 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 190 IPR016181 -
Trre3g02411 395 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 203 388 IPR022677 GO:0004379
Trre3g02411 395 PIRSF N-myristl_transf 1 395 IPR000903 GO:0004379|GO:0006499
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02411 Trre-Chr3 23130072 23131259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02411 1 395 Acyl Lipid Metabolism Gene Families AT5G57020 83.291 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02411 K00671 - gmx:100787291 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02411 3 23130072 23131259 Trre3g02411 3 23130072 23131259 ECH