Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02397 ATGAAGAGAACAATGTGCTATTTCCTAACAGCTTCAATTCTACTTTCGAGTTTAGTTTGTGTAATAAGCAAACCTTGGATGTTGTTTGGTGCTGCAAATCAACAAGCATTCTTCAAAGTTGATCCCACAACTAGAATGCCAGATGTTCCAAGACCATTTGACTCTATACAGGGAAGAAAGGCATTGGAAGAATATGAAGAAGCAATGATGGGAGTGAATAGGATTGGATCAAGACCACCAAGATGTGAACACAAATGTAGAGGATGCATTCCTTGTAACCCGATTCAGATTCCTACCAACAAAAATCATATTGGTGTTCAGTATGCCAATTACGAGCCTGAAGGATGGAGATGCAAGTGCGGCACTTCTTACTTTAGCCCCTAA 384 0.401 MKRTMCYFLTASILLSSLVCVISKPWMLFGAANQQAFFKVDPTTRMPDVPRPFDSIQGRKALEEYEEAMMGVNRIGSRPPRCEHKCRGCIPCNPIQIPTNKNHIGVQYANYEPEGWRCKCGTSYFSP 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02397 127 Pfam Epidermal patterning factor proteins 74 127 - -
Trre3g02397 127 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 57 127 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02397 Trre-Chr3 22932113 22937495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02397 - - tpra:123882903 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02397 3 22932113 22937495 Trre3g02397 3 22932113 22937495 ECH