Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02385 ATGACTAGCAACAACAAAGAAGCTTTCAACATCGCAGATCTCAGTTCTGCAGCACTCAATGAAGAAGATCGTGCAGACCTAGTTAACGCTCTCAAGAGTAAGATACAGAGTCTTGCTGGGCAGCATTCTGATGTTCTAGAGAGTCTGTCCCCTGTTGTCAGGAAGCGTGTTGAGGTTCTCAGAGAGATTCAGGGTGAACATGATGAGTTGGAGGCAAAGTTTTTGGAAGAGAGAGCAGCTCTTGAAGCCAAATACCAAATATTGTATCAACCACTGTACACAAAGCGCTTTGATATTGTGAATGGCGTTGCTGAAGTGGAAGGGGTAGCAAAAGAAGCTACAGCCGATACAGACGAGGCTGAAGAGAAAGGAGTTCCTTCATTTTGGCTCAATGCTATGAAAAACAATGATGTCTTATCTGAAGAGATTACGGAGCGCGATGAAGGTGCTCTAAAGTTTCTCAAAGATATCAAGTGGACCAGGATCGAAGACCCAAAAGGATTCAAGCTTGAATTCTTTTTCGATTCCAATCCATATTTTTCAAACTTGGTCTTGACTAAGACATATCATATGGTTGATGAGGATGAACCTATACTGGAGAAAGCAATTGGGACTGAAATTCAATGGCTTCCTGGAAAATGTCTGACACAAAAGGTTTTGAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAACTTGCGAAAGCTTCTTCAACTTTTTCAATCCACCAGAAGTCCCTGAAGATGATGAAGACATTGATGAGGATATGGCTGAGGAACTTCAGAATCAGATGGAACAAGACTATGACATTGGATCAACAATAAGAGATAAGATCATCCCCCATGCTGTGTCTTGGTTTACTGGGGAGGCTGCTCAGGGAGAGGAGTTTGGAGACCTGGATGATGACGAGGAGGATGAAGACGATGATGGTGACGAGGATGATGAAGAGGAGGATGAAGAGGAGGATGAGGATGATGATGAAGAGGAGGAAGACACTAAGACTAAAAAGAAGTCATCAGCAAGTAAGTCATCTGCTAGTAAGAAGAGCGGAATAGCTCAGCTTGGTGATGGTCAGCAGGGAGAAAGACCACCAGAGTGCAAGCAGCAATAG 1131 0.4315 MTSNNKEAFNIADLSSAALNEEDRADLVNALKSKIQSLAGQHSDVLESLSPVVRKRVEVLREIQGEHDELEAKFLEERAALEAKYQILYQPLYTKRFDIVNGVAEVEGVAKEATADTDEAEEKGVPSFWLNAMKNNDVLSEEITERDEGALKFLKDIKWTRIEDPKGFKLEFFFDSNPYFSNLVLTKTYHMVDEDEPILEKAIGTEIQWLPGKCLTQKVLKKKPKKGSKNAKPITKTETCESFFNFFNPPEVPEDDEDIDEDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGEEFGDLDDDEEDEDDDGDEDDEEEDEEEDEDDDEEEEDTKTKKKSSASKSSASKKSGIAQLGDGQQGERPPECKQQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02385 376 MobiDBLite consensus disorder prediction 301 336 - -
Trre3g02385 376 Coils Coil 103 123 - -
Trre3g02385 376 FunFam Nucleosome assembly protein11 120 296 - -
Trre3g02385 376 FunFam Nucleosome assembly protein 1-like 1 47 105 - -
Trre3g02385 376 Gene3D Nucleosome assembly protein 120 296 - -
Trre3g02385 376 Gene3D - 47 106 - -
Trre3g02385 376 Pfam Nucleosome assembly protein (NAP) 55 296 IPR002164 GO:0005634|GO:0006334
Trre3g02385 376 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 35 315 IPR002164 GO:0005634|GO:0006334
Trre3g02385 376 Coils Coil 60 80 - -
Trre3g02385 376 MobiDBLite consensus disorder prediction 296 376 - -
Trre3g02385 376 SUPERFAMILY NAP-like 32 295 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02385 Trre-Chr3 22731700 22735979 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02385 K11279 - gmx:100785314 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02385 3 22731700 22735979 Trre3g02385 3 22731700 22735979 ECH