Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02347 ATGGTAGTGAAAAAACCAAAGATTGTGATAATTGGAGCTGGAATGGCAGGCTTAACAGCTGCAAATAAGCTCTATACTTCAACAGCTTCAAAGGACTTATTTGAAGTTATTGTTGTTGAAGGTGGAACAAGAATTGGTGGAAGAATCAACACATCAGAATTTGGTGGTGACAAGATTGAGATGGGAGCAACATGGATCCATGGAATTGGTAATAGCCCAATTCATAAAATAGCTCAACAAACAAATTCACTTCAATCTCAACAACCTTGGGAATGCATGGATGGTAATAACAATGATGAATCTATCATAACTATTGCTGAAGGTGGTTTTCATCTTCAACCTTTCATTGTTGATCCTATTACAAAACTCTTCAAATACCTCATGGATTATTCACAAGGTAAACTCACAAAAGAATCTGCAAAAGGTGAAATTTTGAACTACTATAACATGGCTTTAAAAGCTTCTTCAAGAACTTCTTCAAGTTCAAACTTTGTCTCTAAGAAGAATCATCTTAGTATTGGTTCTTTCTTGAGACAAGGTCTTGATTCTTACTTTGAATCAATGAAAGAACAAGAAGAGGTAAAAGGGTGTGAAGATATGAACAATTGGAACAAAAAGTTGCTTCAAGAAGCTGTTTTTGCAATGTATGAGAATACAGAAAGGACTTATACATCAGCAGGTGATTTAGAGAGTTTAGATTATGAAGCTGAAAGTGAGTATAGAATGTTTCCTGGTGAAGAAATCACAATTGCAAAAGGGTATTTAAGCATAATTGAAAATATAGCTTCTGTTTTACCAAATGGTTTAGTTCAATTAGGTAGAAAAGTGAAAAAAATTGAATGGCAAATGCAAAAAAAAAGTGATGATGATCATAGTTTTAGACCTGTTAAGCTACATTTCTATGATGGATCTGTTATGTATGCAGATCATGTTATTGTTACTGTTTCACTAGGTGTTTTAAAAGCTTCTATTAATCATAATCATGATGATGATGATGATGGTGATGATGATGAAGAAAAAGGTATGTATTTTTGTCCTAAGTTACCATCTTTCAAAGTTGAAGCAATTTCAAGACTTGGTTTTGGTGTTGTAAACAAGTTATTTATACAAATGAATGATGAAAATTCAAAAGGGTTATTTCCATTTCTTCAAATGGTGTTTCATTCATCTCAAAATGAAACAAGGGATAAGAAAATACCATGGTGGATGAGGAAAACAGCAACACTTTTTCCTATTTATAATAATTCAAGTGTTCTCTTATCTTGGTTTGCTGGTGAAGAAGCATTAGAACTTGAAAAACTTAAAGATGAAGAAATAATCAATGGTGTTTCAGCAACAGTTTCTAACTTTTTGCCTCATTCAAGTTCAATCAGTAAAGTTTTGAAGAGTAAATGGGGAACAGATCCTCTGTTTTTAGGATCATACAGTTATGTTGCAGTTGGTTCAAGTGGTGAAGATTTAGATACAATGGCTGAACCGTTGCCATTGATCAAAGATAACAGCAATAGCAACACTTTTTCATATCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCATAGAACTCATTATTCAACAACTCATGAAACGAAATCACGTCTCTCTTTGCGTGAGCTCGACCACACGGCTTCCCTTGTTTTCAATTTCAGGTCTGAATTTGGTCTGAATTTAGCCCACTCTTTTGATTTCGCCCAATTGCGTGATATTTGTAAGGAGCTATGGACCGGACATGGATGTCTGCCAATCGAATGTCAAAAGAATACCGAGATGGAGTGA 1776 0.344 MVVKKPKIVIIGAGMAGLTAANKLYTSTASKDLFEVIVVEGGTRIGGRINTSEFGGDKIEMGATWIHGIGNSPIHKIAQQTNSLQSQQPWECMDGNNNDESIITIAEGGFHLQPFIVDPITKLFKYLMDYSQGKLTKESAKGEILNYYNMALKASSRTSSSSNFVSKKNHLSIGSFLRQGLDSYFESMKEQEEVKGCEDMNNWNKKLLQEAVFAMYENTERTYTSAGDLESLDYEAESEYRMFPGEEITIAKGYLSIIENIASVLPNGLVQLGRKVKKIEWQMQKKSDDDHSFRPVKLHFYDGSVMYADHVIVTVSLGVLKASINHNHDDDDDGDDDEEKGMYFCPKLPSFKVEAISRLGFGVVNKLFIQMNDENSKGLFPFLQMVFHSSQNETRDKKIPWWMRKTATLFPIYNNSSVLLSWFAGEEALELEKLKDEEIINGVSATVSNFLPHSSSISKVLKSKWGTDPLFLGSYSYVAVGSSGEDLDTMAEPLPLIKDNSNSNTFSYPLQILFAGEATHRTHYSTTHETKSRLSLRELDHTASLVFNFRSEFGLNLAHSFDFAQLRDICKELWTGHGCLPIECQKNTEME 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02347 591 SUPERFAMILY FAD/NAD(P)-binding domain 3 528 IPR036188 -
Trre3g02347 591 Gene3D - 2 144 IPR036188 -
Trre3g02347 591 Gene3D - 238 528 IPR036188 -
Trre3g02347 591 Pfam Flavin containing amine oxidoreductase 15 528 IPR002937 GO:0016491
Trre3g02347 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 360 477 - -
Trre3g02347 591 Gene3D - 192 483 - -
Trre3g02347 591 PANTHER FLAVIN MONOAMINE OXIDASE 6 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02347 Trre-Chr3 21954969 21961502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02347 K12259 - gmx:100778778 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02347 3 21954969 21961502 Trre3g02347 3 21954969 21961502 ECH