Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02332 ATGATGATGATGATGATAGCTTTAGCAATCTCATTTTATTGGGATTCAGCTTCAGCTTCATCTGTGGGTGAATTTGTTGACAAGACCATTAATTCCCACACGATCGTCATCTTTTCCAAGACCTATTGTCCGTATTGTAGAAGAGCAAAAGCTGTTTTCAAAGAGTTGAACCAAGTACCACATGTTGTCGAGCTTGATGAGAGAGATGATGGTTCGAAGATTCAGGATATTTTGGTTAATATTGTTGGGAAGCGTACCGTGCCACAAGTTTTCATCAATGGAAAACACCTTGGAGGATCAGATGATACTGTCGAAGCTTATGAAAGTGGGCTTCTGGCTAAACTTCTAGGAATTGAGACAGATGATCATCCTGACGATCTCTGA 384 0.4036 MMMMMIALAISFYWDSASASSVGEFVDKTINSHTIVIFSKTYCPYCRRAKAVFKELNQVPHVVELDERDDGSKIQDILVNIVGKRTVPQVFINGKHLGGSDDTVEAYESGLLAKLLGIETDDHPDDL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02332 127 NCBIfam glutaredoxin 35 115 IPR011899 -
Trre3g02332 127 SUPERFAMILY Thioredoxin-like 24 116 IPR036249 -
Trre3g02332 127 PANTHER GLUTAREDOXIN 2 15 117 - -
Trre3g02332 127 ProSitePatterns Glutaredoxin active site. 37 52 IPR011767 -
Trre3g02332 127 Gene3D Glutaredoxin 13 117 - -
Trre3g02332 127 Pfam Glutaredoxin 35 96 IPR002109 -
Trre3g02332 127 CDD GRX_GRXh_1_2_like 35 115 - -
Trre3g02332 127 PRINTS Glutaredoxin signature 80 93 IPR014025 -
Trre3g02332 127 PRINTS Glutaredoxin signature 94 107 IPR014025 -
Trre3g02332 127 PRINTS Glutaredoxin signature 35 53 IPR014025 -
Trre3g02332 127 ProSiteProfiles Glutaredoxin domain profile. 23 123 - -
Trre3g02332 127 FunFam Glutaredoxin 2 17 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02332 Trre-Chr3 21628423 21631090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02332 24 116 Miscellaneous Gene Families AT4G15700 33.333 8.87e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02332 K03676 - gmx:100777703 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02332 3 21628423 21631090 Trre3g02332 3 21628423 21631090 ECH