Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02325 ATGTTCAACTTTTTTATCAGGAAAGATGCCAGAAAGATTCTCAAACGCAAAGATAGTGATGCTGGTGAAAAAGGAAGGGCTTTGGAAGATTTAAGAGCCTCTCTCTTTAATCAATTTAATTTCTCCGATGGTGCTAAACGTCAACAGCGACGTATATGTGGTCCAGCTACTGCACTTACGTTCAATTTTGTGGTTGCAGTTGGTATTATATTCGTAAACAAAATGGTGCTTCAAACTGTTAAATTCAAATTCCCTATACTTCTCACACTAATTCACTATGTAGTGAGTTGGTTTTTAATGGCGGTACTAAAAGCATTTTCGCTCCTTCCTCCATCTCCTTCCACGAAATCAACTCGAATGTCAACTTTATTTACTCTAGGATTTGTTATGTCTCTATCCACTGGCTTCGCTAATGTTAGCTTGAAGTATAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTGACGCCATCAATAGTTTTTGCAGAATTTGTTTTGTATAGGAAGAAAGTATCTTTGCCCAAGGTGTTAGCATTGACGGTGGTATCTATTGGCGTTGCGGTAGCGACAGTGACTGATCTGCAGTTCCATTTATTCGGTGCTTGTGTAGCATTGGCATGGATTGTACCGAGTGCTGTGAACAAGATCCTCTGGTCTAGACTGCAGCAGCAAGAGAACTGGACAGCTTTGTCGTTGATGTGGAAAACAACGCCTATTACTTTAATTTTCCTGGCTGCTATGTTACCTTGCTTAGATCCTCCAGGTGTACTCTCGTTCGATTGGAACTTGAGCAACACTTTGGTAATTTTTGGATCGGCCATTCTTGGATTCTTGCTGCAGTGGTCGGGTGCTTTGGCACTAGGTGCTACATCTGCCGTCTCGCACGTTGTCCTTGGACAGTTTAAGACATGCATCCTGCTTCTAGGAAACTATTATCTCTTTGGATCCAATCCCGGCACAATCAGTATCTGTGGTGCATTCACAGCTATAGGCGGTACGTCTATTTACACTTACCTTAATTTGAAGCAGCAAACAAACAAGGTTTCTACTCGACAACCCTCCGTATTACCTAAATCAAAACTTGGCAAAGAAAACGGCACCACCACTGGCACTGATGGACATTACGGGGTAGAGTCCGTCTAA 1146 0.4206 MFNFFIRKDARKILKRKDSDAGEKGRALEDLRASLFNQFNFSDGAKRQQRRICGPATALTFNFVVAVGIIFVNKMVLQTVKFKFPILLTLIHYVVSWFLMAVLKAFSLLPPSPSTKSTRMSTLFTLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVFAEFVLYRKKVSLPKVLALTVVSIGVAVATVTDLQFHLFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMLPCLDPPGVLSFDWNLSNTLVIFGSAILGFLLQWSGALALGATSAVSHVVLGQFKTCILLLGNYYLFGSNPGTISICGAFTAIGGTSIYTYLNLKQQTNKVSTRQPSVLPKSKLGKENGTTTGTDGHYGVESV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02325 381 PANTHER SOLUTE CARRIER FAMILY 35 58 343 - -
Trre3g02325 381 MobiDBLite consensus disorder prediction 350 381 - -
Trre3g02325 381 Pfam Triose-phosphate Transporter family 60 337 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02325 Trre-Chr3 21564884 21568428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02325 67 362 Organic Solute Cotransporters AT1G77610 25.649 1.00e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02325 - - gmx:100777499 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02325 3 21564884 21568428 Trre3g02325 3 21564884 21568428 ECH