Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02324 ATGCGATCCAAATCGGATAACCCGGTTCAAAACACCACATCCACCACCGTAACCGACTCATCCTCCACCGCATCAATGGATCCAATCTTCCACCTCATTCGCATCCTCCCCTTCAGTTTCCTCCGTCCACCACGTCTCCGCTTAAAGCTTCCATCAATCTCCCTTCCTTCATCCAACGTCGTCTTCGCCCTCGTCCTCCTCACCTACTTCATGGTCGTCTCCGGCATCGTCTACGACATCATCGTCGAGCCTCCCGGTATCGGTTCATCTCAAGATCCATACACCGGCGCTGTTCGACCTGTTGTTTTCATGTCCGGCCGTGTTAACGGTCAGTATATCATCGAAGGTCTTTCTTCTGGATTCATGTTCGTTCTCGGTGGAATTGGTATCATAATGCTGGATCTTGCTCTTGATCGGAATCGTGATAGATCTGTTAAGGTTTCTTATGCTTCTGCTGGTGTTTCTTCGATTGTTCTTGCTTATGTTATGAGTATGCTCTTCATTCGTATCAAGATTCCTGCTTATCTTAGATGA 534 0.4794 MRSKSDNPVQNTTSTTVTDSSSTASMDPIFHLIRILPFSFLRPPRLRLKLPSISLPSSNVVFALVLLTYFMVVSGIVYDIIVEPPGIGSSQDPYTGAVRPVVFMSGRVNGQYIIEGLSSGFMFVLGGIGIIMLDLALDRNRDRSVKVSYASAGVSSIVLAYVMSMLFIRIKIPAYLR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02324 177 PANTHER OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC 11 176 IPR042416 GO:0006486|GO:0008250
Trre3g02324 177 MobiDBLite consensus disorder prediction 1 22 - -
Trre3g02324 177 Pfam OST3 / OST6 family, transporter family 54 175 IPR021149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02324 Trre-Chr3 21542737 21543270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02324 K26501 - gmx:100776829 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02324 3 21542737 21543270 Trre3g02324 3 21542737 21543270 ECH