Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02293 ATGGATTTTCATAACACAACAAGAGAAAAAAACTGGAAACACTCTCTTCTCTATCTAATCTTCATCATTTCCATTCTTCACCTTACAAATCAAACAAATTTCTCACGTAAACTAATTCTCGGCAACGAAACGGTGCGTATCAAGAAGAATCCAGAACTTCCTCTCCGGTTCCGTTCCGACGGTACCTTCAAAATCCTCCAAGTTGCTGATATGCATTATGGAAATGGAATAACGAGATGTAGAGATGTGTTAGCTTCTGAATTTGAATTTTGTTCTGATCTCAATACTACTCGATTTTTGAAGCGTGTTATTGAAGATGAAAGTCCTGATTTTATTGCATTTACCGGAGATAATATATTTGGATCTAGCAGTCCTGATGCTGCAGAATCGATGTTTAAAGCATTTGATCCTGCCATCGAATCAGGGCTTCCTTGGGCTGCAATTTTGGGAAACCATGACCAAGAATCAACTTTGAATCGTGAAGAATTAATGACCTTAATCTCCCTTATGGACTATTCAGTCTCCCAGATCAATCCATCAGCTGATAGTCTTACTGATTCTGCTAAAGGACGCATGATCTCTAAAATTGATGGGTTCGGAAATTATAACCTAAGAGTATATGGTGCCCCAGGTTCAATGCTTGCAAACAACAGTGTTTTGAATCTTTTCTTTCTTGACAGTGGCGACAGGGTCGTTTATCAGGGTATTCGAACTTATGGATGGATCAAAGACTCTCAACTTCAATGGCTGCGTCATGTTTCTCAGGAACTCCAGGGACAAGAGACTGATGCGACTTATCCAATCAAAACACCGGCACTTGCATTTTTCCATATTCCTATTCCAGAAATTCGGCAGCTGTTTTATAAAGAGATTATAGGGCAATTTCAAGAGGGTGTAGCTTGTTCTCGGGTGAACTCAGAAGTCTTGCCAACCTTTGTCTCCATGGGAGATGTGAAAGCCGTTTTCATAGGCCACGATCACACCAATGACTTCTGTGGAAAGTTGGATGGGATATGGTTTTGTTACGGCGGTGGCATCGGTTACCATGGCTATGGAAAAGCTGGGTGGCCAAGGAGAGCAAGAATTATAAGGGCTGAACTTCAGAAGGGAAAAAAGTCATGGACAACTGTGCAGAGAATTATGACTTGGAAACGGCTTGATGATGAGAAACTGAGCAAGATTGATGAACAAATCCTATGGGATCGATTGCTTTCTCGATGA 1221 0.4103 MDFHNTTREKNWKHSLLYLIFIISILHLTNQTNFSRKLILGNETVRIKKNPELPLRFRSDGTFKILQVADMHYGNGITRCRDVLASEFEFCSDLNTTRFLKRVIEDESPDFIAFTGDNIFGSSSPDAAESMFKAFDPAIESGLPWAAILGNHDQESTLNREELMTLISLMDYSVSQINPSADSLTDSAKGRMISKIDGFGNYNLRVYGAPGSMLANNSVLNLFFLDSGDRVVYQGIRTYGWIKDSQLQWLRHVSQELQGQETDATYPIKTPALAFFHIPIPEIRQLFYKEIIGQFQEGVACSRVNSEVLPTFVSMGDVKAVFIGHDHTNDFCGKLDGIWFCYGGGIGYHGYGKAGWPRRARIIRAELQKGKKSWTTVQRIMTWKRLDDEKLSKIDEQILWDRLLSR 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02293 406 CDD MPP_Dcr2 61 341 - -
Trre3g02293 406 PIRSF Ptase_At2g46880 7 400 IPR011230 -
Trre3g02293 406 SUPERFAMILY Metallo-dependent phosphatases 60 393 IPR029052 -
Trre3g02293 406 FunFam Probable inactive purple acid phosphatase 29 62 378 - -
Trre3g02293 406 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 21 402 - -
Trre3g02293 406 Gene3D - 61 380 IPR029052 -
Trre3g02293 406 Pfam Calcineurin-like phosphoesterase 63 328 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02293 Trre-Chr3 21051582 21055847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02293 - - mtr:11444902 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02293 3 21051582 21055847 Trre3g02293 3 21051582 21055847 ECH