Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01730 ATGGCTACTCAAACCTTGCATGAAACAAAGAAATCACAAGCTAAGAGAGCATTACGTTCCCTAGCTATAGGAATTGCAATTCCCTTTACAATAACATTAACAATAATCATTCTCTTTGGATCAGGCAAAAAATACAATGTTTTGGCTAAGCCATTTTGGTTTGCACCACTTTGGTACATTCACTTAGCCACATTGGGCTCATCTTTTTTCATGGGTCTAGCTGCTTGGTTAGTTTGGGCTGATGGTGGATTTCAAGGTGAAACAGATGCATTGTGTTTCTATGTAGCTCATATATGTCTAAGCATTGTTTGGCATCCACTTGTTCTTGTTATGAATGCTTATTGGCTTGCATCAATTTCTGGTCTTGTTGATTGTGGGACACTTTTGATTTGTTACTTGAGGTTTAGAAAGGTTAATCCTTTTGCTAAAGATTTGGCTAAACCATGTTTGGCTTGGACTGTGTATCTTACTCTTGTTAGCTTTAAGTTAATGTTTCTTTGA 501 0.3693 MATQTLHETKKSQAKRALRSLAIGIAIPFTITLTIIILFGSGKKYNVLAKPFWFAPLWYIHLATLGSSFFMGLAAWLVWADGGFQGETDALCFYVAHICLSIVWHPLVLVMNAYWLASISGLVDCGTLLICYLRFRKVNPFAKDLAKPCLAWTVYLTLVSFKLMFL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01730 166 Gene3D TspO/MBR protein 15 166 IPR038330 -
Trre3g01730 166 FunFam translocator protein 2 17 166 - -
Trre3g01730 166 CDD TSPO_MBR 21 161 IPR004307 GO:0016020
Trre3g01730 166 Pfam TspO/MBR family 42 165 IPR004307 GO:0016020
Trre3g01730 166 PIRSF PBR 10 166 IPR004307 GO:0016020
Trre3g01730 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 164 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01730 Trre-Chr3 14066893 14067393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01730 K05770 - gmx:100790873 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01730 3 14066893 14067393 Trre3g01730 3 14066893 14067393 ECH