Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01715 ATGGAAGAAACCATATCCCGCATCGTAACAGAAATCGAAGACCTCCGCGAAAACCACCACATCGACAACCCACAACCACTCTCCGAACAATCCCTCACCGATCTCCAAACCCTCCTAAAAAACTCCCAATCCTTAGACCCACTCTACGACGCCGTTTCACCTTCTCACCTCATTCCACCAATCGCCACCGCAATGGATTCATCACCAACACCTCACTCTCTCCTCGCTTCTCACGTTTTCCTCTCTTTTCTCCTATCTCCAAACGCTCCCGTTTTCACTCTCTTCACTCCTCTTTCATTTCTCTCCTTCCTCCGTTCAATTCGTCGTTCATTCAAAAACCATAACCCTAATAGCAACCCTCAACAAGTTCGAAAACGAAAACGGAACTCAAAAAACAAAAAATCCGTTCAAAATGATGAAGATGAACCTAATTCCCCAAATTCTATACAAAAACTTGATGTTAGGGTTTTACTTCCTCTTTTCGAGAAATTAGTTAGTGTTATGTCGTTAATTCATCTTGATCGTTTTCCGGAAAGTCTGAAATCGTTAGTTCAAACGATTTCTGAAGTTCCTTTGATGGCTATTGAGTCTTGTGGAAATGAGGTTCAATATAGTAGATTGGCTAGTTTATGCTCGAGGATTTTGAAAGAGGTTTTGAAACCGGAGCATGGTGAGCCTTCGGAGACGGCTGCTGAGGTTTTAAAGGCGTTGTCTCCGCTTGTTGTAATGCCGAAATCTCAGGTTAGAAGTTTCGCTGTTGGTTTTGTTACTAGTCTTGCTAGGGATTCTGATGGTGTGAAGAAAGCGTTGGTTAATTTTCCGAGGTATTTGGCGCATAAGGCGCCGGATAAAGCCGAGCCTAGGGCGTTGGCTGTGGATTTTATAATGGAGGTTGTTAGGGTTATGGAATTGGGGGATCAGGTTGAGTTTGTGAAGTATGTTGTGAAGATGACTCAAGGGAAAACTAATTTAAGGCTTTTGGGGGTTGATCTTATTTTGAATTTGGTGACTTCGTTGAAGGATCCTCTAGGGGTGAATTCAATGGAAGAAGAAGGGAAAGAGGCGTGGGGATTGTGGTGTTTAGATGCGTTGGTGAAGCGTTGTTCGGATGTTAGTGCTACGATTCGTGGGCGGGCTTTGTCGAGTTTGGCGCAGGTTGTTGGGTTTCTATCAGGTAGTGATAGGGCTAGTTTGGTTTTGAAAGAGTTTATGGGGTTTGGTGACGGTAATGTTGAGGGTGTGGGAGGAAAGGAAATCAATGAGATGCTGAGGAGAAGGTGTGTGGACGAGAAAGCGATTGTGAGAAAAGCTGCTCTTTTGCTTGTTACTAACTTGACTGCTCTACTTGGAGGTGCGATCGATGAAGTGGTGCTTAAGACAATGGGAATGGCTTGTTCCGATTCACTTGTTAGCATTCGGAAAGCGGCTGTTGCAGCTCTTTCTGAGGCTTTCAGAACATTCTCATCTGAAACAGTAATAACTGAATGGCTACATTCAGTTCCTCGTCAAATAGCTGACAATGAAACTAGCATCCAAGAAGAATGTGAGAACGTGTTTCAAGAACTTGTTTTGGACCGAATATCTAGAGCTGTAGCTGCTAGCTCTTCATATTCCGAATCTATGTCTAGTAGTAAAAAGAAAGGAAAAGGTTTAGACAACGAGGTGGAGATGCCTTTCCCGCAAGGAATTCTGTATCTCATGAGAGAGATTTGCAATGGGGAGGTTAGTCCTTGGGTGAAAAAAATTTGCACAAACCTGGGAAAAAAGAAACGGTTGAATCTCAAAATTGTTACTGCACTTCAGAATATAATCAAGGTGTCCGAATCTATCTGGCTGAACCATAGCAGGCCAATAGAAAAGTGGACTGCCCCACCTGGTGCTTGGTTTCTTTTATCGGAGGTGTCAGTATTCCTTCCAAAAGCAGTGGACTGGAATTTTCTTCAACATCACTGGCAGCTTCTTGACAAACATAAAGTGAAAGGCGAGTTTAGAAGCCCATTTGCACAAAAAAATGCATTTGAAAACGAAGAAAGCATAGAATGCAATAATGTTGCCTGGGCTAGTGACCGAGTTTTCCTCTTGCAAACAATCTCTAATGTTTCTGTGGAACTGCCAGTTGAACCGGCTGCTGAATTGGCTCATAATTTACTCAAAAGGGTTGAAAAATTCAACATGCATTCAACGGAGGTCGATGCTCATGTAAAAGCACTTAAAACATTGTGCAAACGAAAAGCTTCAAATGACACGGAGGCAGAAGAGTTAGTCTTGAGATGGGTACACCAAGTTCTGTCCGGAGCTTCTCGAATAATAGAAACTTTTATTTCATATTATTCAGAGCAAAATGCAGAAACTGATTTCTTCACTCCACCCAGAAGTGGGCCTAGTAAAGGTAGGAAATCAGGAAGAAAGCGCAAGTCATTGTCAAAAGCAATAACAGCAATTTATACAATTGGGTCTTTAGTTATTGTCTGCCCATCTGCTGATATGAGCACTGTAAGTCCATTATTGCACACTATCATCACCTCTGGGAAATCTGTCCCAAAATTAAATAAGCTACCGGGCTCTGCAACTTCTCTACAAGAAGAAGCTCCTTCTTTTTATATTCAAGGGTGGCTGGCCATGGGAAAACTTTGCCTTGCTGATGGGAAGCTTGCAAAGAACTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGACCAACTTGGCAGCTCTTCGCAATAATATTGTGGTCATGATGGCCGACTTCTGCGTTCGGTACACTGCTCTTATTGATGGTTACATAACCAAGATCACAAGGTGTCTCTTAGATCCCTGTGAACTTGTGAGAAGGCAAACATTCATATTGCTATCAAGATTGTTGCAGAGGGACTATGTCAAGTGGAGAGGAGTGCTATTTCTTCGTTTCCTTTTGTCACTTGTTGATGAATCAGAAAAGATTAGGCAGCTAGCGGATTTTCTCTTCGGAAATATTTTGAAAGTCAAGTCTCCTCTTTTAGCATATAATAGTTTTGTTGAGGCTGTTTTTGTTTTGAATGACTGCCATGCCCACACTGGACATCGTGAGTCCAACGAATCACGAACGGAAAGCCAACTTTTTTCGATCAGGGGCGCTGACGAAAGATCAAGGTCTAGAAGAATGCACATTTATGTCTCTCTACTAAAGCAAATGGCTCCTGAGCATCTTTTAGCAACCTTTGCCAAGTTATGTTCAGAAATTCTAGCTGCAGCTTCTGATGGTTTGCTCAATATAGAAGATGCAACTGGACAGTCTGTTTTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCTTTCAATCTACTCGTGTATCATCTGAGTCGGCAGACTTGGAAGAAGAAGGGGGAGAAAATGGATCTTCAACTAGAAAGGCTATAACTCAGGCAGTCAAGAAGGGCCTTATTCAAAACACTGTACCCATCTTCATAGAGTTGAAACGTCTATTGGAAACAAAGAACAGTCCCCTCATAGGCTCTCTCATGGAGTGCCTTCGGGTCCTTCTCAAGGACTACAAAAATGAGATTGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTTATATATGACATGCAGAAATATGAAGCAGCAAAAGCTAAAGCAACAGTTGCTGAGGCCGTAGCCTCCAAGCCAAAATCAATTACATTTCAATCACCTGATGTTACTAAGAATCCGACCAAAGAACATGTTGAAACACATGTACAAAATGAGGACAGTGACAAGTTTCCAAGTGGTTCAAAAATTGCTTCAGCAATGGCAGATGCTGCTGCTGCAGCAACAGCTCGTTCAGTGCTCAAGGAAATTAACAAGGGTACAGCGACACCACAACTTAGCTCTTTGAACGTTCCGAAAGTCAAGTCTTTTACTGGTGAATGTGTATCTAGAAGTGATAAACGTTTGGATCTCATAAAATCTTTGCAGAAAAAACATTCTTTCGATTCCGATGACGACAACTAA 3984 0.4214 MEETISRIVTEIEDLRENHHIDNPQPLSEQSLTDLQTLLKNSQSLDPLYDAVSPSHLIPPIATAMDSSPTPHSLLASHVFLSFLLSPNAPVFTLFTPLSFLSFLRSIRRSFKNHNPNSNPQQVRKRKRNSKNKKSVQNDEDEPNSPNSIQKLDVRVLLPLFEKLVSVMSLIHLDRFPESLKSLVQTISEVPLMAIESCGNEVQYSRLASLCSRILKEVLKPEHGEPSETAAEVLKALSPLVVMPKSQVRSFAVGFVTSLARDSDGVKKALVNFPRYLAHKAPDKAEPRALAVDFIMEVVRVMELGDQVEFVKYVVKMTQGKTNLRLLGVDLILNLVTSLKDPLGVNSMEEEGKEAWGLWCLDALVKRCSDVSATIRGRALSSLAQVVGFLSGSDRASLVLKEFMGFGDGNVEGVGGKEINEMLRRRCVDEKAIVRKAALLLVTNLTALLGGAIDEVVLKTMGMACSDSLVSIRKAAVAALSEAFRTFSSETVITEWLHSVPRQIADNETSIQEECENVFQELVLDRISRAVAASSSYSESMSSSKKKGKGLDNEVEMPFPQGILYLMREICNGEVSPWVKKICTNLGKKKRLNLKIVTALQNIIKVSESIWLNHSRPIEKWTAPPGAWFLLSEVSVFLPKAVDWNFLQHHWQLLDKHKVKGEFRSPFAQKNAFENEESIECNNVAWASDRVFLLQTISNVSVELPVEPAAELAHNLLKRVEKFNMHSTEVDAHVKALKTLCKRKASNDTEAEELVLRWVHQVLSGASRIIETFISYYSEQNAETDFFTPPRSGPSKGRKSGRKRKSLSKAITAIYTIGSLVIVCPSADMSTVSPLLHTIITSGKSVPKLNKLPGSATSLQEEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKTNLAALRNNIVVMMADFCVRYTALIDGYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHTGHRESNESRTESQLFSIRGADERSRSRRMHIYVSLLKQMAPEHLLATFAKLCSEILAAASDGLLNIEDATGQSVLQDTFQILGCKEIRFQSTRVSSESADLEEEGGENGSSTRKAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAEAVASKPKSITFQSPDVTKNPTKEHVETHVQNEDSDKFPSGSKIASAMADAAAAATARSVLKEINKGTATPQLSSLNVPKVKSFTGECVSRSDKRLDLIKSLQKKHSFDSDDDN 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01715 1327 Coils Coil 1175 1195 - -
Trre3g01715 1327 Pfam non-SMC mitotic condensation complex subunit 1 904 1098 IPR032682 -
Trre3g01715 1327 MobiDBLite consensus disorder prediction 785 804 - -
Trre3g01715 1327 Gene3D - 360 529 IPR011989 -
Trre3g01715 1327 PANTHER CONDENSIN 29 1308 IPR026971 GO:0007076
Trre3g01715 1327 SUPERFAMILY ARM repeat 294 1179 IPR016024 -
Trre3g01715 1327 MobiDBLite consensus disorder prediction 112 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01715 Trre-Chr3 13928178 13934054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01715 K11491 - gmx:100793666 1873.6