Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01698 ATGGCAGATCCAAGTTTCTTTGTTGGAGTCATAGGTAACATCATCTCAATTCTCATGTTTATTTCTCCAGTACCAACATTTTGGAGAATAATAAAGCATAGATCTACTGAAGATTTTTCAAGTTTACCTTACATATGCACATTGCTTAATTCATCATTGTGGACTTACTATGGAACAATAAAGGATGGAGAATACCTTGTGGCAACTGTTAATGGCTTTGGCATTGTGGTGGAGACAATCTACATTCTTCTATTTCTCATATATGCACCCCCAAAAATAAGGGTAAAGACTGCAATTATAGGTGGAATTTTGGATGTGGTGATCTTGGCAGCAGCAGTAGTTACTACTCAGTTAGCATTGGAGGGAGATGCTCGTAGTGGTGCCGTTGGTATCATGGGTGCAGCCTTGAATATTCTCATGTATGCCTCACCCCTCGCCGTGATGAAAACAGTGGTGAAGACAAAAAGTGTGGAATATTTGCCATTCCTCCTTTCGTTTTTCTTCTTTATAAACGGTGGCGTTTGGCTATTGTACGCCTTTCTTGTTCGTGATTTTATTCTTGGGGTACCAAACGGTACAGGATTTGTACTTGGAGCTATGCAGTTGGTGTTGTATGGTGTATACAGAAATGGAAAACAATCAAAGAATGATTCAAACAAATTGGAAGAAGGATGGCAACATGAGCCTCTCATCCTCAAGTGA 702 0.3974 MADPSFFVGVIGNIISILMFISPVPTFWRIIKHRSTEDFSSLPYICTLLNSSLWTYYGTIKDGEYLVATVNGFGIVVETIYILLFLIYAPPKIRVKTAIIGGILDVVILAAAVVTTQLALEGDARSGAVGIMGAALNILMYASPLAVMKTVVKTKSVEYLPFLLSFFFFINGGVWLLYAFLVRDFILGVPNGTGFVLGAMQLVLYGVYRNGKQSKNDSNKLEEGWQHEPLILK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01698 233 Pfam Sugar efflux transporter for intercellular exchange 129 212 IPR004316 GO:0016020
Trre3g01698 233 Pfam Sugar efflux transporter for intercellular exchange 7 92 IPR004316 GO:0016020
Trre3g01698 233 FunFam Bidirectional sugar transporter SWEET 125 218 - -
Trre3g01698 233 Gene3D - 7 90 - -
Trre3g01698 233 Gene3D - 127 222 - -
Trre3g01698 233 PANTHER RAG1-ACTIVATING PROTEIN 1 10 221 IPR047664 -
Trre3g01698 233 FunFam Bidirectional sugar transporter SWEET 6 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01698 Trre-Chr3 13782930 13788379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01698 1 228 Miscellaneous Gene Families AT4G15920 58.952 3.89e-94 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01698 K15382 - gmx:100808537 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01698 3 13782930 13788379 Trre3g01698 3 13782930 13788379 ECH