Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01684 ATGACTAGAGATACACCGGAATCGAGTGGAGCATTCCACGCGGTTCATGCAGAGCGTGACTTACAATCCAATTGGGAAGTTGACCTAGCCAAGAAACTTGAAGAGTATTTGCTTAAAATATGTTCTGGTGAAATCACTGGCGAAGATGAAGGAAACATTCATGTGAATTTTGCTGAAGCTGCTTTGCTTCTTCAGGGTTCGATACAGGTGTATAGTCGAAAGGTTGAATATCTCTACAACTTGGTGTTGCGTACTTTGGAGTTCCTTTCTCAGAAAAGACAAGCAGATCAGGTTGATGGGGAATCAGTCCAACCTGAAGAAGCTGGCCCATCTACTGTTGCTGATGAAGAAAATGATCAATTCTGGGGATTTGATGACATCCCAGTTGATGAAAAGAATTCATTGGATAGTTCAACAGGCAAAGACGTGAATTTGGATCAATTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGCGATTGCTTGGATACTGGCGGAGATGGAGGGGAATTGGAGTCTTATCTGCTGTCCACCACTGACTTGTACCAGGATTTTATTTTATTGGACACATCGGATGCTGTTGCAGTTCATGAGTTTATGAAGGGCCAGAATGCTGGTACGACAAATTATGGTACTAATAGAGCTACTTCTACTCGTAAAAGCTTTCTTTCTCCTAGACGTTCTGGTGGAAGTGCTCATAAATCAGTTGCAAAGAGTCAGCGTGCGAATTCCATGTGCTCTCCTAAAAATTTTAGTTTTGAAGACAAAGATGCTCGGCCCAGTTCTCCGGCCTCTGCTGGTTTCGATAACGGTAACTTTGGTCCTAATATGGATGATGGATTTGATGCACCAATGGATACAGACAATTCTGATGCAGATGACGATGATCCATGGAAACCATTGAATCCTCATGAACCAGGAAACTTGAGAGTGAAACCCTTTCGAAAAGTGAAAGTTTCGAAAAAGGTTAGAATCAATGTGAGACCTCGAGTATCTATGACCTCCTTGTTCCCACTTGCAAAATTGCATGGTCCTATCAGTCCAGAGCTCATGAAAATGTGGGAAATGCGACGTTGTGCCCATCAACGACAAAAGGATTCTCAATCTTCTCCACCATTATATGAGAAGCTGAGGCAATCTCTTATTAATGGGGAAAATGAAACTGGTGAACCATTTCTCAACACTGAAGATGACAATGTCAACGATGACAATGACTTTGATAATGGAAATCCCGATTTTGATATGCCTGGCAATGATTTCATGGATGATGATCTACACCCTTTCAATAAAGAGCATGGAGTTGATGATGTTCATGCTCATGCTGATGAAGCTGTAGATCTTGAGTTTCCAGATTCTCAGACAAGTTTGGAAGATCTCTGCCGCTCTCATCTGAATGCTCTCCTAGCTAGCATAGCTGAAACAGAGAAGCAAACAGAAATGGCTGCCAGGGTTTCAACATGGAAACAAAGAATTGAGCACAACTTAGAAGAACAGGAATCACACCCACCGTTTGATATCCGAGACTACGGTGAAAGAATTCTTGACAAACTATCCCTTGAAGAAAGAAATAGTAGTGTCATGCCCTTTTCTAATTTGGTCACGGGACAAGTAAAGTATGACGTCTCCCGAAGTTTCTCTTCACTTCTTCAACTGGTGAACAATGGAGAAGTTGATTTACAAAGACACGATGCCGCAGGGGAGTCTTTTTGTTACACATCTGCTAATCCTTTTAATGTTAAGCTCCTAAAGCATCACAAGAAAAAGGAGGTTACGAAGCAATTTGGTGTATCGAAAAAGCGAGCAAAGTCTCCAATAAAAAAACCGTCTCCGAAGGGCGAGAAAAAAGCTAGAAGAGAAAAATCTCCACAAAAACAACCGTCTCCGAAAGAAGATGAAAAGAAGAAAACTAGAAGGGAAAAGTCTCCCGTCAATTCATCTTCTAGGAATCATCGATCGACAAGTTTATCATCACCTACCAATACCAGGTCATCTTCTCGGAAACATGGACCGACAGGTTTATCATCGCCTACAAATACCAGTTCGTCTTATAGGAAGCACGGACCAACAGGTTTATCATCACCTTCACCTACCATTACCAGTTCATCTTCTAGGAAACATGGACCGACGGGGTTAACATCACCTACCAATTGTAAGTTTTCTGCAAACCTTGGAAAGGGGAGTGCTATGAAGTTCTCTCCTGCATCCAAAAGACGACGTAGATCTCCATTTATCGAGTCAGTTAATTAA 2250 0.4182 MTRDTPESSGAFHAVHAERDLQSNWEVDLAKKLEEYLLKICSGEITGEDEGNIHVNFAEAALLLQGSIQVYSRKVEYLYNLVLRTLEFLSQKRQADQVDGESVQPEEAGPSTVADEENDQFWGFDDIPVDEKNSLDSSTGKDVNLDQFIKPPANLVVLEGDCLDTGGDGGELESYLLSTTDLYQDFILLDTSDAVAVHEFMKGQNAGTTNYGTNRATSTRKSFLSPRRSGGSAHKSVAKSQRANSMCSPKNFSFEDKDARPSSPASAGFDNGNFGPNMDDGFDAPMDTDNSDADDDDPWKPLNPHEPGNLRVKPFRKVKVSKKVRINVRPRVSMTSLFPLAKLHGPISPELMKMWEMRRCAHQRQKDSQSSPPLYEKLRQSLINGENETGEPFLNTEDDNVNDDNDFDNGNPDFDMPGNDFMDDDLHPFNKEHGVDDVHAHADEAVDLEFPDSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNLEEQESHPPFDIRDYGERILDKLSLEERNSSVMPFSNLVTGQVKYDVSRSFSSLLQLVNNGEVDLQRHDAAGESFCYTSANPFNVKLLKHHKKKEVTKQFGVSKKRAKSPIKKPSPKGEKKARREKSPQKQPSPKEDEKKKTRREKSPVNSSSRNHRSTSLSSPTNTRSSSRKHGPTGLSSPTNTSSSYRKHGPTGLSSPSPTITSSSSRKHGPTGLTSPTNCKFSANLGKGSAMKFSPASKRRRRSPFIESVN 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01684 749 MobiDBLite consensus disorder prediction 607 646 - -
Trre3g01684 749 MobiDBLite consensus disorder prediction 95 115 - -
Trre3g01684 749 MobiDBLite consensus disorder prediction 647 723 - -
Trre3g01684 749 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 7 746 IPR031739 GO:0030261
Trre3g01684 749 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 298 590 IPR031737 -
Trre3g01684 749 MobiDBLite consensus disorder prediction 206 311 - -
Trre3g01684 749 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 150 297 IPR031719 -
Trre3g01684 749 MobiDBLite consensus disorder prediction 206 226 - -
Trre3g01684 749 MobiDBLite consensus disorder prediction 588 606 - -
Trre3g01684 749 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 13 127 IPR009378 -
Trre3g01684 749 MobiDBLite consensus disorder prediction 588 749 - -
Trre3g01684 749 MobiDBLite consensus disorder prediction 234 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01684 Trre-Chr3 13571384 13576422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01684 K11490 - gmx:100786571 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01684 3 13571384 13576422 Trre3g01684 3 13571384 13576422 ECH