Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01607 ATGAACTTGAAGACTAGCAGTCAGGTGGAGACTAGGACTCTCCTTGAGGAGGTTTGTAACTTTGATAGGAAAGGTCTGTTTGATCTTGGCCACCCTCTTGTTAACCGCATCGCTGAAAGCTTTGTCAAAGCTGCTGGAATTGGTGCTGTTCAAGCTGTTTCTCGTGATGCTTATTTCATAGCCACTCAAGGTAACAACGTTGGTAGCAATGGCGTTATTCCTCCAGCAGATGTTTCAGCTACCAACAAAAGACGTTTACCGGCCGGTCTTAGAGGAGAGACCAGTAACAAATCCCTTGAGGCCATGGTTATCAACACTGGGAAAGAGGCCTTACAATGGGGAGTGGCTGCAGGAATATATTCAGGCCTAACATATGGGCTGAAGGAAGCTCGCGGAGCTCATGACTGGAAAAACAGCGCAGTTGCCGGAGCAATCACCGGGGCCACCCTTGCACTTACATTGGAAGACTCGACTCATGAACAAGTTGTTCAATGTGCTATCACTGGAGCTGCAATTTCAACTGCTGCAAATATATTCAAAGGGATTTTCTAA 552 0.4674 MNLKTSSQVETRTLLEEVCNFDRKGLFDLGHPLVNRIAESFVKAAGIGAVQAVSRDAYFIATQGNNVGSNGVIPPADVSATNKRRLPAGLRGETSNKSLEAMVINTGKEALQWGVAAGIYSGLTYGLKEARGAHDWKNSAVAGAITGATLALTLEDSTHEQVVQCAITGAAISTAANIFKGIF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01607 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 34 173 - -
Trre3g01607 183 PANTHER TIM23 18 180 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01607 Trre-Chr3 12776094 12778193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01607 - - gmx:100305849 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01607 3 12776094 12778193 Trre3g01607 3 12776094 12778193 ECH