Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01586 ATGGCAAGTGGAAGGAGATTGGGTATAGCTGTGGATTTCTCACCATGCAGCGTTAAAGCATTGCAATGGACTATAGATAATCTTGTCAAAGAAGGTGATAACCTCATTCTTGTTATCGTTAGCCCAGAAGAGTATGAGCATGGCGAAATGCAGCTTTGGTCTGTTACCGGTTCGCCTCTCACACCTCTAGCTGAATTCAATGACTCTGCACTCTCAAAGAAATATGAAATCAAACCAAGCCCTGAAGTAATCAAAATTGCCACAACTGCTGCTGAGCAGAAAAAGGTTACGGTGCATGTAAAGATTTATTGGGGAGATGCTGGTGAAAAATTATGTGAAGCGATTGAACAGGTACCTCTAGATAGTCTTACCATGGGGAACAGAGGCCTTGGCACCATTAGAAGGGCTATAATGGGCAGTGTTAGCAACCATGTAGTGAATCATGCTACCTGTCCAGTTATTGTGGTGAAGAGTCCAGACCACCACCATTAA 492 0.435 MASGRRLGIAVDFSPCSVKALQWTIDNLVKEGDNLILVIVSPEEYEHGEMQLWSVTGSPLTPLAEFNDSALSKKYEIKPSPEVIKIATTAAEQKKVTVHVKIYWGDAGEKLCEAIEQVPLDSLTMGNRGLGTIRRAIMGSVSNHVVNHATCPVIVVKSPDHHH 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01586 163 PRINTS Universal stress protein signature 135 157 IPR006015 -
Trre3g01586 163 PRINTS Universal stress protein signature 4 22 IPR006015 -
Trre3g01586 163 PRINTS Universal stress protein signature 117 129 IPR006015 -
Trre3g01586 163 CDD USP_Like 6 156 - -
Trre3g01586 163 Gene3D HUPs 4 163 IPR014729 -
Trre3g01586 163 Pfam Universal stress protein family 5 157 IPR006016 -
Trre3g01586 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 159 - -
Trre3g01586 163 PANTHER IMP2'P 1 161 - -
Trre3g01586 163 FunFam Universal stress protein family protein 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01586 Trre-Chr3 12590631 12593902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01586 - - gmx:100816534 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01586 3 12590631 12593902 Trre3g01586 3 12590631 12593902 ECH