Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01582 ATGTCTAGTTTGAGATTTTTGTGTGCCACAAATATCTTTACCTCAACTCAACATAAAGTCAATAACAATAACAAGTGTGTTCTTCATCAGAAAGTGAAGAACCTCATCAACACTTTGGAACTTCCTTCCATTTCATCATCATCATCATCATCAACTACTCCAATTCAGTCTCTCCATAGTGGCAATTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGCGCTGCTGATGCATCGGTTGTTAGTGCTGTGAATGAAGGAATTCAAGCTGCAAGAGATATCTTATGCTGCCATAGAAGACCATGGGTTATGATCAGTGTTAATGATGATAAAGATCTTCATTTTCGCAAAGCCGAATTTGATCCGGAGGACTGTCCAGCCGACTGTTCACGCCCTTGTGAAAATGTCTGTCCTGCAAATGCAATCTCATTCCAAGAGAAATCTACTTTAGGAATTTCATATAATACCGAAGCATCAAGAGTAATGAACGTGCAGGACGGTGTCATAACTGAACGCTGTTACGGCTGTGGTCGATGTCTTCCGGTTTGCCCTTATGATAAAATAAGAGAGGTAACGTATGTTAGGGATGCTATTACAACTTCTGATCTAATCAAGAGAAATGATGTTGATGCTATAGAGATACATACAAGTGGAAGACAGAGTAGACAGTTCGAAGAACTCTGGCGTGCTTTAGGAGATTCGGTACAAAATTTGAAGCTAGTAGCCGTTAGTTTACCTAATGTCGGAGATTCAACGATATCGTCTATGAACAAAATGTTCTCTATTATGAAACCAAATCTTGAAAGCTTCAACTTATGGCAGTTAGATGGTCGTCCAATGAGTGGCGATATTGGTAGAGGAGCAACTAAGGAGTCGATAGCTTTTGCTGTTCAATTGGCTAAAGCCAAAGATAGACCTCCCGGCTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATTGAAGGGTTGAAAAAAGAAGGACTCTTTCAAACAACCAGTACAGAATACTTGGATCATGAAAAGTCAACAATTCGTTCATCTAATCCATCGTGTGCTTTAATTAGCGGCATAGCTTATGGCGGCTACGCGCGAAAGATTGTTGGAAGAGTATTGAGATCCATGCAATCTCAACATGGTGGAGCTGCTTCAATTGAGGATCATCCTGAGCATCTCTTATTGGCTCTAAGGGAAGCACTTACTTTGGTTGGACCTGTTAAATGTCTATAA 1293 0.406 MSSLRFLCATNIFTSTQHKVNNNNKCVLHQKVKNLINTLELPSISSSSSSSTTPIQSLHSGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAARDILCCHRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAISFQEKSTLGISYNTEASRVMNVQDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTSDLIKRNDVDAIEIHTSGRQSRQFEELWRALGDSVQNLKLVAVSLPNVGDSTISSMNKMFSIMKPNLESFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAKDRPPGFLQLAGGTNAHTIEGLKKEGLFQTTSTEYLDHEKSTIRSSNPSCALISGIAYGGYARKIVGRVLRSMQSQHGGAASIEDHPEHLLLALREALTLVGPVKCL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01582 430 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 137 168 IPR017896 -
Trre3g01582 430 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 IPR017900 -
Trre3g01582 430 Gene3D - 130 259 - -
Trre3g01582 430 SUPERFAMILY 4Fe-4S ferredoxins 112 212 - -
Trre3g01582 430 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 185 214 IPR017896 -
Trre3g01582 430 Pfam Iron-Sulfur binding protein C terminal 224 425 IPR021039 -
Trre3g01582 430 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 59 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01582 Trre-Chr3 12569957 12573495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01582 - - gmx:100804088 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01582 3 12569957 12573495 Trre3g01582 3 12569957 12573495 ECH