Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01573 ATGGAAGGTGGAGATGAAGGAGTAGAGATGGTGATTGATTCCAAAGACATGCAGCAGCAGAGTAAAGCTTTCGATAAGCTTACTGACCGCGTCGAAGATCGTCAGCTTGATTCAACTCGCGTTCAAGAAGCCATGGCTTCCATTGCAGCTTCTGCTGAAGCTGATTGGAATACTATGCGCTTGAGGGAGAAAGAATTAGCTGCTGTCAAGATAAATGCAGCAGATGTTGATATAATTGCAAACGAACTAGAGCTGGACAAAAAGGTGGCAGAAAGAACCTTGCGTGAGCATAAAGGTGACGCAGTTGCTGCTATTCGTCATTTACTTCACTAG 333 0.4474 MEGGDEGVEMVIDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNTMRLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01573 110 Coils Coil 80 100 - -
Trre3g01573 110 CDD UBA_HYPK 69 109 IPR038922 -
Trre3g01573 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Trre3g01573 110 Gene3D - 70 108 - -
Trre3g01573 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01573 Trre-Chr3 12501624 12504177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01573 - - zju:107418997 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01573 3 12501624 12504177 Trre3g01573 3 12501624 12504177 ECH