Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01563 ATGGCTTCTTCGTCTTCATCATCGGTTGCTACAGAGCGAAGAGGAATACCAGGTGCTCAGTTCGTTGAAGATGTTCAAACTTATCTCAATCAATTAGGTCTCGATGTTAATTCCTCTCTCGCTTTTCTTCAAGAAAGACTTCAGCAATACAAGGTTGTTGAAATGAAGCTTCTTGCTCAGCAAAGGGAACTTCAGGCAAAGATACCAGATATTGAAAAGTGCTTAGAAGTTGTTGCTACATTGCAAGCTAAGAAGGGTACTGGTGAGGAACTTATTACTGATTTTGAGGTGTCAGAAGGAATATATTCACGAGCTTCTATAGAAGAAACTGATTCTGTGTGTTTATGGCTGGGAGCAAATGTTATGTTGGAATATTCATTAGAAGAGGCTACTGCTCTTCTACAGAAAAACCTGGATAATGCTAGAGCAAGTTTAGAAGTTCTTGTTGCTGATCTATTGTTTTTAAGGGACCAAACGACAATTACTCAGGTTACGATTGCTCGTGTTTATAATTGGGATGTTCATCAACGGAGAACTCAACAAGTTGCTGCTACTGCGATTGCTCAAGAGTAG 573 0.3962 MASSSSSSVATERRGIPGAQFVEDVQTYLNQLGLDVNSSLAFLQERLQQYKVVEMKLLAQQRELQAKIPDIEKCLEVVATLQAKKGTGEELITDFEVSEGIYSRASIEETDSVCLWLGANVMLEYSLEEATALLQKNLDNARASLEVLVADLLFLRDQTTITQVTIARVYNWDVHQRRTQQVAATAIAQE 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01563 190 PANTHER PREFOLDIN SUBUNIT 3 4 181 IPR016655 GO:0006457|GO:0016272
Trre3g01563 190 Gene3D - 35 183 IPR009053 -
Trre3g01563 190 FunFam Prefoldin subunit 3 34 177 - -
Trre3g01563 190 Pfam Prefoldin subunit 50 172 IPR004127 -
Trre3g01563 190 SUPERFAMILY Prefoldin 40 168 - -
Trre3g01563 190 PIRSF Prefoldin_3 1 188 IPR016655 GO:0006457|GO:0016272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01563 Trre-Chr3 12407345 12412589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01563 - - csav:115724073 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01563 3 12407345 12412589 Trre3g01563 3 12407345 12412589 ECH