Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01531 ATGGCTAGGAAGGGTAATCAACAGAAGAATGGAGTTAACCATAAAAAAGGGGTTTCTGGTGGTGTTCTTCCGGGTATGAAAGGTCATGAAGGAGGGCAGGTGAAGGTTTTTCCGGCGGAGGAACTTGCAAATGGCGACCGTGGTCTTTCGCAGAAAGCGTGCGAGGCTAGTTCTGCTGGTGATGAGAATAACAGTGAGCGAAAATTCGAGAAGTTTTCTCGGAAAGATAAGCAAGGGATGAGTGCAAAGCATGAACCGGAGGAATCGTTTTCTTTTGGCAGTAGTTCGGAGAATGGCAGTGAGAATGCCGAAGTTCCAATACAAGAAGGAAAATTGGAAGGTTTACGGAGTATCAAGAGTAGGTTGAGCCATTTAGTGGAAGGTTTACAGTTGAGAAGTATGGTAGAAAAATTGGAGCTTGCTGATCATGCGGCTATTAGAAGATTAAGGCTGTCAGTATTATCCATTTTTATAGCAGTTACGGAGTGGCTAACTAGGCAGAAACCGTTGTTTTTATCTATTAGAACTACCGTTTTCGAAGCTTGCGCTAATTTCAAGGCAAAGGTTAAGCAGGCATATCCAGTTGTTCTGACGTGGCTCATGCACTTTGGGAGCATAATCCTTCTATTATCACTGTTTTGGTTGGACTGTGCCATTCGGGGTATTGGTTCAGTTGTACAATTGGGTACAGCATCCATGTTCACTGTTATATGGTGCAGCATATTCTCCGTGATGAGTATGATAGGGATGCTCAAGGTTCTAGTTATCTTGGGTCTGGCTACCTTGATTGCATATTTTCTTGCCTTCGTGATTGCATTGTTTGTAGTTGCTGTCCTCGGAGTTATTATTTTGTGGTTTTATGGTAGCTTCTGGACAACTACATTTTTCCTCTTCCTTGGAGGATTGGCATTTATGTTACGTCATGATCGTGTGGCACTTTTTATCACAACTGTGTATTCTGTGTATTGTGCTTGGCTGTATGTTGGGTGGCTTCGTTTGTTCTTGGCTTTTAATTTAACTTTCATCTCGAGTGATGTTCTGGTATATTTTCTCAAGAAACACATAGATCAACAGAATAGATCGAATTCATTCGAGCAAAGAGCTGGAATGAACAGTCAACCAGGTTTTGGAAATGATGAATCAATGCCGCCGTCTTCCTCCGAAAATGGACCAGGGCCATATGCAGACCGTAATGCAGGAGTCCCTTCAACCAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTTGTTCGATTGTTGAACTGTTCTGATCACTATTCAGCACTGGGCTTGACGCGCTATCAAAATATAGATGTTTCAATACTGAAGCGGGAATATAGAAAGAAGGCAATGTTGGTACACCCTGATAAAAATATGGGTAATGAAAAGGCTGTAGAAGCATTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAGATTCTCAATGTATTCAACAGATTTAGTAATGCTCCCCGTCGGAATAGTAGGCATGGATTCTTTTCTTCTGGGTTTGGACATTCAGATGCAGATGGTGAGGAGCCATTTGGTGATTCAAGGCGAATAGCTTGCAAAAAGTGTGGTGGCTTTCATCTCTGGATACACACTAAGAAACAAAAGTCTCGGGCCAGATGGTGCCAGGATTGTCAAGATTTTCACCAAGCCAAGGATGGTGACGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTACAGAAGGTAGACAATCCTTGTGCTTATGTGTGTGCAGATAGCAAAATATTTGATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCAAATACACACAAGCCAAGTTTTCATGTGAACACCAGTATAATGTCGAAACATAATCCCGGCAAAGGAACTAGCTCTTCAACGCCAAGAGGTGGGCGGGTGCCGACACCTCCTAATATGCCAACACCTAATTTTGAAGAAACCATGACTGAGGAAGAATTTGTTGAGTGGTTACAGAATGCAGTACAATCAGGCGTGTTTGACAATTTCAGCGGCGGCGCTGCAACAGACAGCCCATCCGGCAAATCTGGAAATGGGATGAAAAATCCTGGCACTGGCACTGGCACTGGCGTCGGTAGCGGCAGCAAAAGAAAGAAAAAAGGAAAAAAGCAATGGTGA 2202 0.4282 MARKGNQQKNGVNHKKGVSGGVLPGMKGHEGGQVKVFPAEELANGDRGLSQKACEASSAGDENNSERKFEKFSRKDKQGMSAKHEPEESFSFGSSSENGSENAEVPIQEGKLEGLRSIKSRLSHLVEGLQLRSMVEKLELADHAAIRRLRLSVLSIFIAVTEWLTRQKPLFLSIRTTVFEACANFKAKVKQAYPVVLTWLMHFGSIILLLSLFWLDCAIRGIGSVVQLGTASMFTVIWCSIFSVMSMIGMLKVLVILGLATLIAYFLAFVIALFVVAVLGVIILWFYGSFWTTTFFLFLGGLAFMLRHDRVALFITTVYSVYCAWLYVGWLRLFLAFNLTFISSDVLVYFLKKHIDQQNRSNSFEQRAGMNSQPGFGNDESMPPSSSENGPGPYADRNAGVPSTSGVDSDVTSEDEVVRLLNCSDHYSALGLTRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILMDSLKRKAYDDELRREEILNVFNRFSNAPRRNSRHGFFSSGFGHSDADGEEPFGDSRRIACKKCGGFHLWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDNPCAYVCADSKIFDATEWYICQGMRCPANTHKPSFHVNTSIMSKHNPGKGTSSSTPRGGRVPTPPNMPTPNFEETMTEEEFVEWLQNAVQSGVFDNFSGGAATDSPSGKSGNGMKNPGTGTGTGVGSGSKRKKKGKKQW 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01531 733 PANTHER OS03G0832900 PROTEIN 1 733 - -
Trre3g01531 733 MobiDBLite consensus disorder prediction 689 720 - -
Trre3g01531 733 MobiDBLite consensus disorder prediction 61 84 - -
Trre3g01531 733 Pfam DnaJ domain 425 489 IPR001623 -
Trre3g01531 733 MobiDBLite consensus disorder prediction 88 103 - -
Trre3g01531 733 MobiDBLite consensus disorder prediction 1 105 - -
Trre3g01531 733 MobiDBLite consensus disorder prediction 632 654 - -
Trre3g01531 733 Pfam Cleavage inducing molecular chaperone 535 632 IPR032843 -
Trre3g01531 733 MobiDBLite consensus disorder prediction 363 410 - -
Trre3g01531 733 PRINTS DnaJ domain signature 464 484 IPR001623 -
Trre3g01531 733 PRINTS DnaJ domain signature 447 462 IPR001623 -
Trre3g01531 733 ProSitePatterns Nt-dnaJ domain signature. 469 488 IPR018253 -
Trre3g01531 733 SMART dnaj_3 424 484 IPR001623 -
Trre3g01531 733 CDD DnaJ 425 481 IPR001623 -
Trre3g01531 733 MobiDBLite consensus disorder prediction 689 733 - -
Trre3g01531 733 MobiDBLite consensus disorder prediction 632 665 - -
Trre3g01531 733 MobiDBLite consensus disorder prediction 363 392 - -
Trre3g01531 733 Gene3D DnaJ domain 413 505 IPR036869 -
Trre3g01531 733 SUPERFAMILY Chaperone J-domain 420 517 IPR036869 -
Trre3g01531 733 ProSiteProfiles dnaJ domain profile. 425 492 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01531 Trre-Chr3 12103175 12109031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01531 1 690 Miscellaneous Gene Families AT5G49580 51.926 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01531 K09534 - gmx:100789594 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01531 3 12103175 12109031 Trre3g01531 3 12103175 12109031 ECH