Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01178 ATGGCAGATCTCAAGTCCACATTCTTGAATGTCTACTCTGTTCTCAAATCTGAGCTTCTCCATGACCCTGCTTTCGAGTGGTCTGATGATTCTCGTCAATGGGTTGATAGGATGCTGGACTACAATGTGCCAGGAGGGAAGCTGAACCGTGGACTATCGGTTATTGACAGCTACAGATTGTTGAAAGAAGGGCAGACATTAAATGATGACGAAATTTTCCAAGCTAGTGCTCTTGGTTGGTGTATTGAATGGCTTCAGGCATATTTTCTTGTTCTTGACGACATTATGGATAACTCCCATACACGTCGTGGTCAGCCATGCTGGTTTAGAGTACCCAAGGTTGGAATTATTGCAGCGAATGATGGAGTTCTACTAAGAAACCATATTCCGCGTATCCTTAAGAAACATTTCAGGGGAAAGCCGTATTATGTTGATCTTCTTGATTTGTTCAATGAGGTTGAGTTCCAAACTGCTGCAGGACAGATGATAGATCTGATCACCACACTGGAAGGGGAAAAAGACCTGTCCAAATACACACTATCACTGCACCGGCGTATTGTTCAGTTCAAGACTGCCTACTATTCATTTTACCTTCCTGTTGCATGTGCATTGCTCATGGCGGGTGAGAATCTGGATAACCATGTTGATGTGAAGAATGTTCTTGTTGAGATGGGAACATATTTTCAAGTTCAGGATGATTATTTGGATTGCTTTGGTGATCCTGAAACAATTGGAAAGATAGGTACAGATATTGAAGACTTTAAGTGCTCTTGGCTAGTTGTGAAAGCATTGGAACTTTCCAATGAAGAACAAAAGAAGGTTTTACATGAGAACTATGGGAAGCCTGATCCAGTAAATGTTGCTAAAGTCAAAGCCCTTTATAATGAGCTCAATCTCGAGGGTGTATTTGTGGAATATGAGAGTGCGAGCTATGTGAAGCTTGTAACCTCCATCGAAGCTCATCCTAGCAAAGCAGTTCAAGCGGTATTGAAGTCCTTTTTGGCTAAAATTTACAAGAGGCAGAAGTAG 1029 0.4179 MADLKSTFLNVYSVLKSELLHDPAFEWSDDSRQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQTLNDDEIFQASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGIIAANDGVLLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQFKTAYYSFYLPVACALLMAGENLDNHVDVKNVLVEMGTYFQVQDDYLDCFGDPETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLHENYGKPDPVNVAKVKALYNELNLEGVFVEYESASYVKLVTSIEAHPSKAVQAVLKSFLAKIYKRQK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01178 342 ProSitePatterns Polyprenyl synthases signature 2. 224 236 IPR033749 -
Trre3g01178 342 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 2 342 IPR039702 GO:0008299|GO:0016765
Trre3g01178 342 FunFam Farnesyl pyrophosphate synthase 1 341 - -
Trre3g01178 342 SFLD Polyprenyl Transferase Like 19 340 - -
Trre3g01178 342 ProSitePatterns Polyprenyl synthases signature 1. 90 104 IPR033749 -
Trre3g01178 342 SFLD Isoprenoid Synthase Type I 19 340 - -
Trre3g01178 342 Gene3D Farnesyl Diphosphate Synthase 2 341 IPR008949 -
Trre3g01178 342 Pfam Polyprenyl synthetase 33 296 IPR000092 GO:0008299
Trre3g01178 342 SUPERFAMILY Terpenoid synthases 6 341 IPR008949 -
Trre3g01178 342 CDD Trans_IPPS_HT 30 265 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01178 Trre-Chr3 8817557 8821506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01178 K00787 - gmx:100782137 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01178 3 8817557 8821506 Trre3g01178 3 8817557 8821506 ECH