Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01171 ATGAGTTTCAGATCAACCAGAGAAAATTCTCCGAAGGAACCAGGTTCTCCGAAGGGAGAGAGGGTAATCGACACAAGAGCGCCATTTCAATCTGTAAGAGCTGCTGTTAGTTTGTTTGGTGAAGTTCGTGCCAAGAAGGAAAGGCGTGATAATGCTATCAAGAGAAAATCTTCAGAGAATGTATTGGAAAAGGAGACACAGCTTCTATTGGCTCAAAGAGAATTGAACAAGATAAAGAAACAGCTAGACAATGCTGAGAATACGAAATCTAAAGCGCTCTCCGAGCTAGATAAGGCGAATGTGACACTTCAAGAATTGACAAAGAAACTCAACACTGTGAGAGAATCAAAGCAATCAGCAATAGAAGAAAGCGAGGTTGTGAAGAATCAAGCAAAAGAACTCGAAAAGGCGCTATCGCAAAAAGCGATAGGATATGAAGCTTGGAAACAAGAGCTAGAACATGCAAGAAAAGAGTACACTACAACTGTAAAAGAACTAGATGCTTCTAAGCAAGAACTGAACAAAATCAGACAAGATTTCGATGCGGCTTTGGAGGCGAAATTGGCTGCATTTCAGATGGCAGGAGAAGCGCAGCGTTCTGCGAAATTGAATTCCGAAAAGATCAATGAACTCTCAAAGGAAATTGCAACAATGAAAGAATCAACTGAACAGTTTAAGTTAGCAACTGCACAAGCACAACAAGAACAGATAAAAGCGACGGGAGAAAGAGAAGAAAAGTTGAACTTTTATAAAACTTCAAAGGAGGAAGTAGAGAAGAAAATGATGGAACTAAAGAGTGAGTATGATCAAGAAGAAACAGAAAGTCTCGAGGCAAAACTTCTCGAGACAAGTGCTGAGATTCAGGCTCTTCAAGAGCAGATAAAAGAGAATCATGATTCTGAGATGGATTCTGTCGAGGTAATAACTTCGGAAATCAAAGAAGCCACAAAAACATTGCAGGAAATTTCTGAAGAAGAAATTTCACTGAGAAACCTTGTCGATTCCCTTAAGACAGAATTAGAACAAGTGAAGAAAGAACAACAGGAACTTAAGGAGAAGGAACAAGCATCAGAAGCACTTGCAGCAAACCTAACCGGCGAACTACAAAGTAGCAAAGAAGAAGAAGACTCTCTTGAGAATAAAGTATCTAATGATAATCATTGCCGCGACATAGAATTGAAAATCAAGCAGTTATTATTCGAGACGGAAAATGCAAGAAAAGAAGAAGAAGAGATGAGAATAAAATCTGAGGAACTGAAACAAGAAGCTGAGAAATCAAAAGCTTTGTCTGAAGAAATAGAAGGGAAACTAGAACTTCTATTTAAACAAGCTGAAGAAGCAAAAGCAGCAGAAAAAAGAGCTGTCGAGGAAATGAAATTGTTGTCTGATTCACAAGGTAGCGTCTCAGTTTCTGAATCGAGTGGTAAGATCGTATTGACGGTTGATGAATTTGCTGCTCTAAGTGGAAAAATTAAAGAATCTGAAGATTTGATTGAGAGAACAGAAGCAACTGCAATGGCTCAGGTTGAAGCAATCAATACAAGAAGAAATGAAGTTGACAAAAAAGTTGAAGCTAATCTTAAAGCAATTGAAGAAATTAAAGCAGCAACAGATTTGGCTTTGAGGAATGCCGAAATGGCAGATTCGGCAAAACTAGCAGTTGAAAGTGAATTAAAGAGGTGGCGTCAAGAGGAACAAAACGGCGTATCTGATTTGGATTACTCAGATAATTCTTCAAGACCGATCTCCCTACACAGCTAG 1761 0.3884 MSFRSTRENSPKEPGSPKGERVIDTRAPFQSVRAAVSLFGEVRAKKERRDNAIKRKSSENVLEKETQLLLAQRELNKIKKQLDNAENTKSKALSELDKANVTLQELTKKLNTVRESKQSAIEESEVVKNQAKELEKALSQKAIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDAALEAKLAAFQMAGEAQRSAKLNSEKINELSKEIATMKESTEQFKLATAQAQQEQIKATGEREEKLNFYKTSKEEVEKKMMELKSEYDQEETESLEAKLLETSAEIQALQEQIKENHDSEMDSVEVITSEIKEATKTLQEISEEEISLRNLVDSLKTELEQVKKEQQELKEKEQASEALAANLTGELQSSKEEEDSLENKVSNDNHCRDIELKIKQLLFETENARKEEEEMRIKSEELKQEAEKSKALSEEIEGKLELLFKQAEEAKAAEKRAVEEMKLLSDSQGSVSVSESSGKIVLTVDEFAALSGKIKESEDLIERTEATAMAQVEAINTRRNEVDKKVEANLKAIEEIKAATDLALRNAEMADSAKLAVESELKRWRQEEQNGVSDLDYSDNSSRPISLHS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01171 586 Coils Coil 305 381 - -
Trre3g01171 586 MobiDBLite consensus disorder prediction 369 383 - -
Trre3g01171 586 Coils Coil 402 461 - -
Trre3g01171 586 Coils Coil 145 186 - -
Trre3g01171 586 MobiDBLite consensus disorder prediction 570 586 - -
Trre3g01171 586 Pfam Weak chloroplast movement under blue light 22 566 IPR008545 -
Trre3g01171 586 MobiDBLite consensus disorder prediction 1 27 - -
Trre3g01171 586 Coils Coil 247 293 - -
Trre3g01171 586 MobiDBLite consensus disorder prediction 564 586 - -
Trre3g01171 586 MobiDBLite consensus disorder prediction 346 383 - -
Trre3g01171 586 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 23 567 - -
Trre3g01171 586 Coils Coil 61 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01171 Trre-Chr3 8758646 8761036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01171 - - gmx:100818297 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01171 3 8758646 8761036 Trre3g01171 3 8758646 8761036 ECH