Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01131 ATGTCTAGTGACGAGGTTGATCCTGTTTTTGTGTCATGGGAAGAGGAATTGATATGTCAAGAACGTGGGAACCGAGTGATTCATTTTTACTTGAGAGATATGTCTGGGAATTCTGTGCTTGCTGTTGTTGGTACTGAGAGGAGTGTGAGGCATATGATGTATGTTGTTCCTCAACAATTTTTGCAGGTTTATGGATCCACCACCATTACTTATAAATGGAGGGCAAGGAGGGAGGTTGTTGATTGGCTTAACCATTTGGTTTCGAGGAATCAATCACATCGTGCTGGTGAACTACTGGATGATTCAGGAAAAGCGGTAGGATACACAGATGGAATCAATGCTAATAACAAAAAAATACCTGATAAACTGATTTCTAAGAATCTGAAATTTCAAAGTTCAGATATTGAATGGTCCGGCACTGCTTGGTCTTGTGCTAAACAGCTGAAGCACTACTCAGGATTTGACAGGAAAGGGACAACAATATATGTTCATTCATTTGTGTATATTATGGCTGAAGAGGAAAATCCTTATCTTGGTTACTTGGAAGATATGTATGAAGACAAAAAGAAACAAAAAAAGGTGAAGGTGCGGTGGTTCCACCGTGGTCAGGAAGTTAAGCATGTGATTCCTGAGCTTGATCTTCGAGAGGGTGAGGTTATCATCACATCTAATGTTCAGGTGATCAGTGCCGAGTGTGTCAATGGTCCTGCAACAGTTCTGACTCCTAAGCACTATGAGAAATACAAAGTTGATTTGCCGCATACCTCTTCATCTGAAATCCATATATGCTTTAGGCAGCTTAAAAATAATAAGCTTAAACCCTTTGCGCTTACTAAGTTGCGTGGTTATAGTAACCAGCCTATACTTTCTGGTTTGGATAGCCCTACTCTTTCCAAAAGAAAGGCAAACTGTCCGAAATTTGACGATGGTGAGAACTTCACTCAGGATGATCCTTTGAGGCCCAGCAAAAAGAGGAATAGAAGTTCTGTGGAGTATTCTGTAGCTGAAAAGGGATTTTCTGGTCAGCAAACTTCTTCTATGAATGAGATGTCAAAAGATGAACTGAAACACCCAAGTCTGAAACTAAAACTGTCGAGAAAAACAATGGGTGTTAAGGCTATTGAACCTAAGCCTGAACCGCCTTTTAAGGTCAATGATAAGATTGAGTTTCTCTGTCAAGATAGTGGCATTAGAGGGTGCTGGTTTAGATGTACAATCTTGTACGCATCTCATAAGCGGCTGAAGGTCCGATATGATGATCTGATGGACGCAGATGACGTGGACAAACTAGAGGAATGGATCCCTGCATCAAGAGTGGCAAAGCCTTGCAAACTCGGTATGCGATGTGAAGGCCGTTTAACAGTACGGCCACGCCCTCCTGAATTTATTAAAGGTTATCCTTTCGAGATTGGAGCAGCAGTGGATGCCTGGTGTGGTGATGGATGGTGGGAAAGTGTTATAACTGCTGTCGATACTTCTGGAGCTGGAACCTGTCAGGTTTATTCACCTGGTGAAGAGAAGTATATAGTGGTTGAAATGGACGACATTCGGATTTCCCGAGATTGGATTGATAACAGGTGGGTTGAGATAGTAGGAAAGCCCGACATTTGCAGCTTTTTGAATTCAAATGTCGGTTCCTCTGCAAAGCTGTCAGCTAATTCTGCAGTGGTCAACGAACCTGTCATTGGAAGTTCTGCAACATTAGAAAGTAAACCGCTGCCAATTGCCGAGGTTGAAGCTGCTCCAAAAGTTGAGCAAGAATCATCTGGTCTGGAATCACTTAATGGCGGTATGAAGAGAATGACTTTGTGGAAACCACCACTCCATGCCATTCACGAAGACGAGGTTATCAAATCCGATGGTGATACCAACAATGCTGACGATGAAATCAAGCCCAAGGATCGTAACTCTGGTAGTAGCAGTGACGATGATGACGATGGCACTGACAATGACGGTGATGATGCTGATGTTGATGCCGATGCTGACAACAATGGAGAGGAAGACAACGAGGAGAATTTGGTGATGGAGGAAAGATTTGGTTGTTCTGAACCAAAACTCGATGCAGCCGAAGCAATACAGGTTACATGA 2088 0.4272 MSSDEVDPVFVSWEEELICQERGNRVIHFYLRDMSGNSVLAVVGTERSVRHMMYVVPQQFLQVYGSTTITYKWRARREVVDWLNHLVSRNQSHRAGELLDDSGKAVGYTDGINANNKKIPDKLISKNLKFQSSDIEWSGTAWSCAKQLKHYSGFDRKGTTIYVHSFVYIMAEEENPYLGYLEDMYEDKKKQKKVKVRWFHRGQEVKHVIPELDLREGEVIITSNVQVISAECVNGPATVLTPKHYEKYKVDLPHTSSSEIHICFRQLKNNKLKPFALTKLRGYSNQPILSGLDSPTLSKRKANCPKFDDGENFTQDDPLRPSKKRNRSSVEYSVAEKGFSGQQTSSMNEMSKDELKHPSLKLKLSRKTMGVKAIEPKPEPPFKVNDKIEFLCQDSGIRGCWFRCTILYASHKRLKVRYDDLMDADDVDKLEEWIPASRVAKPCKLGMRCEGRLTVRPRPPEFIKGYPFEIGAAVDAWCGDGWWESVITAVDTSGAGTCQVYSPGEEKYIVVEMDDIRISRDWIDNRWVEIVGKPDICSFLNSNVGSSAKLSANSAVVNEPVIGSSATLESKPLPIAEVEAAPKVEQESSGLESLNGGMKRMTLWKPPLHAIHEDEVIKSDGDTNNADDEIKPKDRNSGSSSDDDDDGTDNDGDDADVDADADNNGEEDNEENLVMEERFGCSEPKLDAAEAIQVT 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01131 695 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 378 582 - -
Trre3g01131 695 SMART BAH_4 159 278 IPR001025 GO:0003682
Trre3g01131 695 MobiDBLite consensus disorder prediction 291 357 - -
Trre3g01131 695 MobiDBLite consensus disorder prediction 614 642 - -
Trre3g01131 695 SMART agenet_At_2 466 524 IPR014002 -
Trre3g01131 695 SMART agenet_At_2 380 445 IPR014002 -
Trre3g01131 695 ProSiteProfiles BAH domain profile. 159 278 IPR001025 GO:0003682
Trre3g01131 695 MobiDBLite consensus disorder prediction 333 349 - -
Trre3g01131 695 MobiDBLite consensus disorder prediction 302 331 - -
Trre3g01131 695 Pfam BAH domain 160 253 IPR001025 GO:0003682
Trre3g01131 695 Pfam Agenet domain 385 460 IPR008395 -
Trre3g01131 695 Gene3D - 127 278 IPR043151 -
Trre3g01131 695 MobiDBLite consensus disorder prediction 643 673 - -
Trre3g01131 695 MobiDBLite consensus disorder prediction 614 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01131 Trre-Chr3 8251373 8256789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01131 - - gmx:100816046 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01131 3 8251373 8256789 Trre3g01131 3 8251373 8256789 ECH