Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01001 ATGGCTTCAATACAAGTTTCATCTATGCTTTGTTCTTCAAATACAATCAAATCCTCTTTCCATGTACCAAAACTTCCTAAATCTCTTTCTTACATAACTCCTAAAGTGAGACCAAGTAGAAAGCTATTTGAGGAATTAAATGGTCAACTCACACACACAATTCCAATTAAGATCCAAGAAAATGATTATTATTATTCACCAAAAAGTTCTCCACCCTCACCTTCATCGTCGAAAACTAAAACCATTACTCAACTCTATGCGATTCTAGAATCGGTATCCGATAGAATAGAAATGCATCAAAACATTGGTGAACAACGCGATAATTGGAATACCCTTTTGTTAAATTCTATCAACATGATCACTCTCACCGCATCTGCTATGGCGGGTATTGCAGCGATAAGTGGCTCCGGCGCGCCTCTTTTGGCTCTTAAATTATCTTCTGCGCTTTTGTTCTCCGCTTCAACGGGTATGTTGATTATCATGAACAAAATTCAACCTTCGCAACTAGCTGAGGAGCAAAGAAACGCAACGAGATTATTTAAATCGCTCAAGTCCAACATCGAAACCACAATAGCAATAGGGAATCCGACAAAGGAATATGTAAAGGATGCAATTGCAAATGTTTTAGCTCTTGATAAAGCTTATCCACTTCCTTTGTTAGGAGTTATGATTGAAAAATTTCCTCAAAAATATGAACCTGCTAATTGGTTACCGACAAAAAAATCATCTAGAAGCAACAAGATTTCTCAAATTAATGAAACAAAACAAAAGGGGTGGAAGAAAAATGGATGGAATGAAGGATTAGAAAGTGAAATTAAAGATGTATTAGAAGTTATGAAGAGAAAAGATATGGAAGATTATGAGAGATTAGGTAACTTGGTGTTGAAGATTAACAAGACTTTGGCAATTGCAGGGCCTTTACTAACTGGAATTGCAGCTGTGGGGTCCACATTTGTAGGTCAAGATTCATGGACATCTATAGTACCTGTTATGGCTGGAGCATTGGCAACAGCAGTTAATTCATTTGAGCATGGTGGACAAGTTGGTATGGTTGCTGAGATGTATAGAACCTGTGGTGGATTCTTTCAAATGATGGAAAATTCTATTCAAGAGAATATATCAGAGGAAGATGAAGAACAAAGAGAGAATGGAGAGTTGTTTGAAATTAAGTTGGCTTTGAAATTAGGAAGAAGTTTGTCACAATTAAGAGATCTTGCTAGAAAATCAGCTTATTCTCGCGAAGAGGGGACACCAGTTGATGAATTTGCTAGCAAGTTGTTCTAA 1284 0.3684 MASIQVSSMLCSSNTIKSSFHVPKLPKSLSYITPKVRPSRKLFEELNGQLTHTIPIKIQENDYYYSPKSSPPSPSSSKTKTITQLYAILESVSDRIEMHQNIGEQRDNWNTLLLNSINMITLTASAMAGIAAISGSGAPLLALKLSSALLFSASTGMLIIMNKIQPSQLAEEQRNATRLFKSLKSNIETTIAIGNPTKEYVKDAIANVLALDKAYPLPLLGVMIEKFPQKYEPANWLPTKKSSRSNKISQINETKQKGWKKNGWNEGLESEIKDVLEVMKRKDMEDYERLGNLVLKINKTLAIAGPLLTGIAAVGSTFVGQDSWTSIVPVMAGALATAVNSFEHGGQVGMVAEMYRTCGGFFQMMENSIQENISEEDEEQRENGELFEIKLALKLGRSLSQLRDLARKSAYSREEGTPVDEFASKLF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01001 427 Pfam Petal formation-expressed 84 403 IPR027949 -
Trre3g01001 427 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 1 427 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01001 Trre-Chr3 7155433 7156716 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01001 - - gmx:100799496 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01001 3 7155433 7156716 Trre3g01001 3 7155433 7156716 ECH