Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00467 ATGAGTGGTGGGTCATTGGGTATTCGTTCAGGTAGTTATGGATCTTTGGAGAAACAATTACAGAATGGATTATCACCTATTCAAACAGGACGTAAACCTTCTAAGATGCTTAAAGAGAAAGAGAAATTATTTCATTGGATCTGCAAATTCGCTGGTCGGAAGAAGGTTGGAATGTTGTTTCTTTGTGTTATCTCTGCTGCGGTTTTCGTCTGGGTTTTGTACGTTGGAAAAGGTGAAGATTCGCAGGAGGGGAACGGTGTGCAAAACATTAATGTGAATGAGAGTATGTCTATAAGTGACGCTCCTCCATCTTTGATCTCTGCGGCAAAGATCACGGACTTTGCTACTAATTTGGTACTACCCCTGTCTCCGCCAAGTTATTTTCTGGGTTATACTCTTCCTCCAGGGCATCGGTGTAATAGTTTTACACTCCCTCCACCACCAGCAGATAAAAAGCGTACTGGGCCACGGCCATGTCCGGTATGTTACCTTTCTGTGGATGAAGCCATTGCACTTATGCCAAAGTTTCCCTCACCGTCTCCAGTGCTTACGAATTTAACATTTACCTATGAGGAAAATCTAAGCAGAGATGGAGAATTTGGCGGTTCGGACTTTGGTGGATATCCCACTTTGAGGCAAAGAAATGATTCTTTTGATATACGGGAGTCAATGAATGTGCACTGTGGATTTGTTAGAGGAATTAAACCTGGCCGCAACACAGGATTTGACATGGATGAAGATGACCTTCTTGATATGGAGCAATGCCGTGGCATAGTTGTTGCGTCAGCCATATTTGGAAATTTTGATGAGATAAATGAGCCAAAAAATATAAGCGAGTATTCAAAGCAGACTGTATGCTTCCTTATGTTTGTAGATGAAGAAACGGAAAAATATTTGAGGAGTTCTGGCAGGCTGGGAGTCAGCAAGAAGATTGGTTTATGGAGAATTATTGTCGCCCGTAATCTTCCTTATACAGATGCCAGACGTTCAGGGAAGATTCCAAAGCTTCTATTGCATAGAATGGCTCCAAATGCACGCTACTCTATATGGCTTGATGGAAAGCTTGAGCTTGTTGTTGATCCATATCAGATCCTTGAAAGGTTTCTGTGGAGGAACAATGCAACTTTTGCAATATCCAAACATTATAGGCGCTTTGATGTATTTGTTGAAGCCGAGGCAAATAAAGCTGCTGCAAAGTATGATAACGCTTCTATTGACTTCCAGATTGAGTTTTACAAGAACGAGGGACTGACTCCGTACACAGAGGCCAAACTTCCTCTTATAAGTGATGTTCCTGAAGGATGTGTAATAATACGCGAGCATGTTCCTATTAGCAACCTCTTTACTTGTCTTTGGTTCAATGAAGTTGACCGGTTTACTTCTAGGGACCAGATTAGTTTCTCAACTGTCCGGGACAAATTTTTGTCGAGGGTGGATTTTCATTTTAACATGTTCTTGGATTGTGAAAGACGCAACTTCGTAGTTCAGAAATACCATAGGGATGTATTGGAGCGACTAGCTGCACCGGTGATTGTTGCTCTTGATCCGCCACCACCTCCTCCCTCGTCTCCCCCTCCTCCATTACCTATAATTGAAACTACACAAGAAAAAGTTGTTATTCCAATAGCTAGGAGAGGTCCTGGAAGACGTGGAAGAGATAGGAGAGCGGGTTCAAAACGCCACCGCAAAGTTGTGGCTGGAAATAGAGACATTGAAGCAAATTAA 1725 0.4249 MSGGSLGIRSGSYGSLEKQLQNGLSPIQTGRKPSKMLKEKEKLFHWICKFAGRKKVGMLFLCVISAAVFVWVLYVGKGEDSQEGNGVQNINVNESMSISDAPPSLISAAKITDFATNLVLPLSPPSYFLGYTLPPGHRCNSFTLPPPPADKKRTGPRPCPVCYLSVDEAIALMPKFPSPSPVLTNLTFTYEENLSRDGEFGGSDFGGYPTLRQRNDSFDIRESMNVHCGFVRGIKPGRNTGFDMDEDDLLDMEQCRGIVVASAIFGNFDEINEPKNISEYSKQTVCFLMFVDEETEKYLRSSGRLGVSKKIGLWRIIVARNLPYTDARRSGKIPKLLLHRMAPNARYSIWLDGKLELVVDPYQILERFLWRNNATFAISKHYRRFDVFVEAEANKAAAKYDNASIDFQIEFYKNEGLTPYTEAKLPLISDVPEGCVIIREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKFLSRVDFHFNMFLDCERRNFVVQKYHRDVLERLAAPVIVALDPPPPPPSSPPPPLPIIETTQEKVVIPIARRGPGRRGRDRRAGSKRHRKVVAGNRDIEAN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00467 574 Pfam Protein of unknown function (DUF616) 186 499 IPR006852 -
Trre3g00467 574 MobiDBLite consensus disorder prediction 548 562 - -
Trre3g00467 574 MobiDBLite consensus disorder prediction 544 574 - -
Trre3g00467 574 PANTHER ALKALINE CERAMIDASE-RELATED 39 501 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00467 Trre-Chr3 3084749 3088686 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00467 - - gmx:100792761 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00467 3 3084749 3088686 Trre3g00467 3 3084749 3088686 ECH
Trre7g03565 7 42431220 42435701 Trre3g00467 3 3084749 3088686 PCT