Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00461 ATGGAACTTTCTTATTCTACCATCACTCATTTCACATTCTTCCTTTTCTTCTTCTTCATCTTCGTAGCTTCAAACCCTTCCGATTCATCTTTCAAAACAACCTACGACCGTCTCTGCAACACCGTCGTCCCCGCATCAACAGCTCTGTTCAATGCCGAAACATCTCCCCGTCTCGCCGAATTTATCCGATTTCAGTCCGGTTACTTCTCCGGCGGCGATCCAATTTTCAACCGATCCACCTCCGAAAGCCTCTCAAAGCATGTCTTCTTTCACGTGAACTCCGTCCGGAGAACTTCCACCGACGGAGTTCACGAATTGCAGGGGCAAGTGATTCTCCGGCAGCGAGTAGGAGTAAGCCGCAGGTCGTTGGTGATGGTTTATCCGGGACATAGGGTTTCGCGTTGGAAGGTTTTGGGGATGAATGTTCATCTCAATGGTTATTGGTCACAATCTTCTGGTAAGCTTTGCATGTTTGGAACTGGAACTTATGGTTATGGTAGTAGGAATATTAGGTATAATGTTAATGTTGTTCTTAAGCTTCGTTATCCGAATGATGTTACGCTTTCGAATAGTTTGATTAGTGGAAGTTTAGAAACTTTTGATGATATGAAATTTGAACCCATTTCAATATTGGCTTTATCTCAGAGTCCAAATTATAGCTTTACAATGATTGAGAACAAAAATGGTGGTGGTTGTGTAGCTGGAGCAGACGGGGAGAGTTTGAGTTATAGAAATCTGAACCAAGGTGCTTGCAGTATGTTTTCTGGACATAGGGATAGGTTTCAGCTTGAATATGGGAGTAACTGTCATAATCCTAGTTGCAGTCCACTTGGTGGTGGTGGTGGTTTTGAGAATTTGCCGGGTTTAATGCATTTCTACCCTACTCGGTGTGTGGATAGGCGGAAGATTCATATGCTGTTGGGTTTTCCTAACTTGGATTATAATGACTATGTGTTTCCGTTTTATCCTAATACAACGTTGATATCTGAGGGGGTGTGGGATGAGAAGGAGAATCAGCTTTGTGCGGTTGTCTGCCGGATTTTGAACTTCACCGGATCCCCTTATGTTGGAGATTGTTCGATTAAGCTCACGTTAAGATTTCCTGCTGTGTTGTCTTTGAGAAATAGGAGTACTGTTTTGGGCCGGATATGGAGTGATAAACTTGTTGGTGAATCTGGTTACTTTGGTAGCATTGGATTTGAGGGTAACTGGAAGACATCAAGAGTTGTGCCTGGTTTACAATACAAGTATACTGAAATTGACAGAGTAAGAAAGTCTTGTGGAGAAAAGGTGACTGCTGGAGGAAAAGGAAAGAAGTATCCTGATGGATTTTCTTCTGATATGTCATTCAGCTTGATGGTGACAGACCCTAAAGGAAAAGTAGCTCAAGGTTACTCGTCACCACTGTGTGTTGGTGATCAAATATATGACGGGCAGACTTATGGGGTTCCATTTGTGCCGACAAATGGAAACTTGAAAGCACGCGGTTTTCAATTCAGCCGTTCATTGAATGTCAGTTATACGATAACCTTGAACCATTCTCCTGATGTTAAGTTTGGTGGTCAAGTCTATGCAGGAGAAATTAAAATTAATGCTGAAGGATTGTACAATAGGAAAACTGGAGTTCTGTGTCTGGTAGGATGTCGGCATTTGAGGACAAATGACAAAATACTGATAAAGAACGAGTCTCTGGACTGTGAAATCATGGTTAATGTCCAGTTTCCTCCAATGAATGGAAAAGGAGGTGAATCTGTTAAAGGAACTATAGAAAGCACACGACAAAAGGCAGACCCTTATTATTTTGAGCCACTTCAGTTGTCTTCAAATTCTATTTACAGACACCAAGCAGAAGCATCCATTTGGAGAATGGACTTTGAGGTAATTATGGTATTGATATCAAACACACTTTCTTGTGTGTTTGTAGGATTGCAACTCTTCCATGTGAAAAAGAACTCAGAAGTACTTCCTCACATTTCCATTGTGATGCTTCTTGTTATTACTCTAGGTCACATGATTCCCCTGATGCTGAACTTTGAAGCCTTGTTCAAGGTGAATCATAATAGTGTGCCGAATGCTTTTATTAGGAGTGGAGGGTGGCTTGAAGTGAATGAAGTCATTGTGAGGATGGTGACAATGGTAGCTTTTCTTCTAGAGTTGCGCCTTGTACAGTTGACCTGGTCTTCAAGACAGGGCGAGGAAAGCCAGATAAGCTTGTGGGCTTCCGAAAAAAGGGTTCTTTATACGACGCTACCATTGTATTTTGGAGGTGGATTGACTGCTTTGTTGGTGCACATATGGAAGAATTCTAGCCAGAGAAGCTCTCGACCACTCCATCTTTCACGCCATAGGTCTAAGTTTCCTCTTGTTGGACGGCATTCTTATCACAGTCCTTCACTCTGGGAAGACTTCAAATCTTATGCTGGTTTACTCCTGGATGGGTTTCTGCTTCCACAAATTCTGTTCAACATATTGTCTAACTCTGGAGAAAAAGCTCTAGCATCTTCATTTTATTTTGGAACAACCATTGTTCGTATACTCCCCCATGCATATGATCTTTATAGAACTCACAGTTCTTCATGGTACCTTGATATGTCATACATATACGCAGACCATAGAATGGATTTTTATTCCACAGCTTGGGACATCATAATTCCAATTGGTGCTCTTTTATTCGCTTTCCTCGTATACTTTCAGCAAAGATTCGGAAGCCGCTGCTTTCTTCCAAAGAGGTTCAGAGAAGATTCTTCCTATGAGAAAGTACCTGTTATTGGTAATGATGATTTGTGA 2787 0.4169 MELSYSTITHFTFFLFFFFIFVASNPSDSSFKTTYDRLCNTVVPASTALFNAETSPRLAEFIRFQSGYFSGGDPIFNRSTSESLSKHVFFHVNSVRRTSTDGVHELQGQVILRQRVGVSRRSLVMVYPGHRVSRWKVLGMNVHLNGYWSQSSGKLCMFGTGTYGYGSRNIRYNVNVVLKLRYPNDVTLSNSLISGSLETFDDMKFEPISILALSQSPNYSFTMIENKNGGGCVAGADGESLSYRNLNQGACSMFSGHRDRFQLEYGSNCHNPSCSPLGGGGGFENLPGLMHFYPTRCVDRRKIHMLLGFPNLDYNDYVFPFYPNTTLISEGVWDEKENQLCAVVCRILNFTGSPYVGDCSIKLTLRFPAVLSLRNRSTVLGRIWSDKLVGESGYFGSIGFEGNWKTSRVVPGLQYKYTEIDRVRKSCGEKVTAGGKGKKYPDGFSSDMSFSLMVTDPKGKVAQGYSSPLCVGDQIYDGQTYGVPFVPTNGNLKARGFQFSRSLNVSYTITLNHSPDVKFGGQVYAGEIKINAEGLYNRKTGVLCLVGCRHLRTNDKILIKNESLDCEIMVNVQFPPMNGKGGESVKGTIESTRQKADPYYFEPLQLSSNSIYRHQAEASIWRMDFEVIMVLISNTLSCVFVGLQLFHVKKNSEVLPHISIVMLLVITLGHMIPLMLNFEALFKVNHNSVPNAFIRSGGWLEVNEVIVRMVTMVAFLLELRLVQLTWSSRQGEESQISLWASEKRVLYTTLPLYFGGGLTALLVHIWKNSSQRSSRPLHLSRHRSKFPLVGRHSYHSPSLWEDFKSYAGLLLDGFLLPQILFNILSNSGEKALASSFYFGTTIVRILPHAYDLYRTHSSSWYLDMSYIYADHRMDFYSTAWDIIIPIGALLFAFLVYFQQRFGSRCFLPKRFREDSSYEKVPVIGNDDL 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00461 928 Pfam Protein of unknown function (DUF2921) 37 907 IPR021319 -
Trre3g00461 928 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 7 923 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00461 Trre-Chr3 3042512 3045298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00461 - - aprc:113848765 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00461 3 3042512 3045298 Trre3g00461 3 3042512 3045298 ECH