Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00415 ATGGATTCCAACACCATTCTTGATTATGCTTTGTTTCAACTCACCCCAACAAGAACAAGATTTGAGCTTTTAGTCTTTAATGGAACTATTCGTGAGAAAATAGCTTCTGGGTTATTTGAACCTTTCATTTCTCATCTCAAATTTGTTAAAGATGAGATCTCTAAAGGTGGTTATTCTATTAGGCTTCTTCCTCCATCCAACACTGCTTTTTGGTTCTCCAAATCCACCTTTGAGAGATTTGTGCGGTTTGTTAGCACACCTGCAGTTCTTGAGAGATTTGTTAGCCTTGAAAAAGAAATCCAGCAGATTGAAGGTCAATTTCAAGCGAACGCGTTATCGATGTCAGTAACAATCCCAGATGAAGGAAACTTGCCACAAACAAATGGAAACACAAGGAGGTTGAGTGATTCTACAAAGTTAAATGATGTACTTGAAGGAGTTGACAATAAAGAAGAGGAAAACTCAAAGATTTCCCTGCAACGTCTTTTGGAGTCTCGAATCGCACTACTTCGGAAAGAGCAAGCAATGGCGTATACTCGTAGTCTTGTTGCTGGATTTGATATTGACAACATCAATGATCTTGTATATTTTGCAAATGCATTTGGAGCATCGCGTTTAAGGGAAGCTTGCATCAATTTTAAGGATTTGTGGAAGAAAAAGCATGCAGATGATCTTTGGGTTCAGGAAGTAGCTGCAATGCAGTCAAGTTTACCACCGGCGCTCTCATTTTCTGGATCATCAGGAATCATACTCGCGAATGACATAACTTCCCATGAGCAGAATAACAAGAATAATAGCTCTACAGACAGTATTCCTTCCGGCGATGAAAATGCATTTTTGGAAACATCAAACAAAAAAGAAGATGTGAACTTGTCACACACGGCGAATGTTCATATGCCAATGCATATGCCATGGCCTTACAACGTACCGCCGTATATGTATAATCCTGGTCAGCAAATGCCTTACCAAGGATATCCTCCTTACCATCAAAATAATATGCATTGGTCTTCTAACATGGGAGTGAATCAAAAACCATCAGCAACTAAAAAAGAGAAATCTCATTATAAGAAAAGATCAGAAGAATATGAAGAGGAGCAAACTGAGTCCAGTGATCCTGATTCTGGAAGTGAATCTGATTCGGATAAACAGAAAGAGTCGAACAATTCTTTGAAGGAAGAAAAGAGGAAAAAGCACAGAAGAAAATCAACTGGAACAGTTGTGATACGAAATATCAACTACATCACTCCAAAAAGGAGAAATGGAAATGAGAGTGGAAACTCTGATGAATCTTCTTTAGAAGACAATGCTGTCTTCGATGAAGAAACCATCAAACAGAAGGTTGGTGATGCACTTGAATCATTGCAAAAGGTTCATAAATCTGAAAAACGTGGTAATCGAAAAAAATCAGCGGCCAAACACAATGCAACTAAATCAAGTGATGCTGCTGACGAAGACGACTCTGAAGATGGCAACAAAAATGAGAATTGGAATGCATTCCAGAGCCTTTTGAAGATAGATACGGCCGAGGCTGGAATTAATGAATCAGAACAGATGCAATCGGTTGATGTTCAGGATGAACATTTTGTGCTGAGAAATTCTGAAGGAAGAAGTTCTTCTCCAAAGAATCGTGAAGTTGTGAACGACTCCTTTATTGTGACTGATAGAGACAGAGGAAATGAAGGCGGATCGAAGCTGACTGAATATGTAGACAACTATGGCCCAATTACAAAGATCAAGGAAAATATTGGTGAAGATATATTGCTATCACACATATCAAGAGAACCGAAAAATGAACTTGATGATCCATTAAATACGTCTGCTGCAGATTCATTACAAACCAAGGGAAGAGGGTCAGAAGATTGGTTCATTGTTGATAACAATTTGGCAAATACGAGAAGCCATGATTCGTCAATTGTGCCTATAGTGTTTGATTCATCCAATGCTGAAAAAAGAAGTGACAGACCTATCATTGATGATTCCTTTATGATACAAGGTCAATTGGTAGATAATAATCTTTCTGATTCGCAATGGAAGACGGATATGAGTATGGTTGAAGATCTAACATCTTCTAACAAGCTAGAAAGTGACACAAAAGAAAAGAATGCATCACCAAAGATAGAAGAACCAAATGACCTCTGTATGGTTCTACAACGCGATTCTGGATTCGATTCAGTTGAGGCCTCAAGGACCATGGACTATGAAATTGACTTTTCTTACTCAGAACCTGATAGAAGAACTTCTGTTGATGATTCACAAGTTAACGTGAATAACAATCTTCCAAGTAGTCCAAAGAAAACCAATGTCGTTAAAAGCAAAGTCTCGCGTTTGTCTGGAAAGGGCACGCCGCCTGATATGATTTCAAGGAACAGAAAGCCGTCTCTCCCAAAAAGGCCTATAGTTCAGAAGAGTCAAAGGGAAAAGGAAGATGAAATGAGGAGGCAGTTGGAAGAAAAGGCGATTGAACGCCAGAAGAGAATTGCCGAAAGAACTGCATCTTCTGGTGTTGCAGCAAAGGTTTCTCCAAAGACTGACAAGAATAAGACTCAAACTGTTAATAAACAGACAAACAGAATCAGTTCTGTTAAGGTCAGAGGAAATTAG 2601 0.3887 MDSNTILDYALFQLTPTRTRFELLVFNGTIREKIASGLFEPFISHLKFVKDEISKGGYSIRLLPPSNTAFWFSKSTFERFVRFVSTPAVLERFVSLEKEIQQIEGQFQANALSMSVTIPDEGNLPQTNGNTRRLSDSTKLNDVLEGVDNKEEENSKISLQRLLESRIALLRKEQAMAYTRSLVAGFDIDNINDLVYFANAFGASRLREACINFKDLWKKKHADDLWVQEVAAMQSSLPPALSFSGSSGIILANDITSHEQNNKNNSSTDSIPSGDENAFLETSNKKEDVNLSHTANVHMPMHMPWPYNVPPYMYNPGQQMPYQGYPPYHQNNMHWSSNMGVNQKPSATKKEKSHYKKRSEEYEEEQTESSDPDSGSESDSDKQKESNNSLKEEKRKKHRRKSTGTVVIRNINYITPKRRNGNESGNSDESSLEDNAVFDEETIKQKVGDALESLQKVHKSEKRGNRKKSAAKHNATKSSDAADEDDSEDGNKNENWNAFQSLLKIDTAEAGINESEQMQSVDVQDEHFVLRNSEGRSSSPKNREVVNDSFIVTDRDRGNEGGSKLTEYVDNYGPITKIKENIGEDILLSHISREPKNELDDPLNTSAADSLQTKGRGSEDWFIVDNNLANTRSHDSSIVPIVFDSSNAEKRSDRPIIDDSFMIQGQLVDNNLSDSQWKTDMSMVEDLTSSNKLESDTKEKNASPKIEEPNDLCMVLQRDSGFDSVEASRTMDYEIDFSYSEPDRRTSVDDSQVNVNNNLPSSPKKTNVVKSKVSRLSGKGTPPDMISRNRKPSLPKRPIVQKSQREKEDEMRRQLEEKAIERQKRIAERTASSGVAAKVSPKTDKNKTQTVNKQTNRISSVKVRGN 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00415 866 MobiDBLite consensus disorder prediction 336 434 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 691 706 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 800 828 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 257 288 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 532 561 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 405 432 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 836 866 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 749 774 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 257 279 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 449 495 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 347 364 - -
Trre3g00415 866 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 854 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 688 707 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 375 392 - -
Trre3g00415 866 MobiDBLite consensus disorder prediction 741 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00415 Trre-Chr3 2793520 2797593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00415 - - ccaj:109803488 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00415 3 2793520 2797593 Trre3g00415 3 2793520 2797593 ECH