Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00314 ATGAGTTCATTTTCTCTATTGTGTGTCTTGGGTTTATTTCTCATTATTGGTCATGTTGCACTTGCACAAGACTCACCAACAGACTATGTCGACGCCCACAACGCAGCAAGATCCGAGGTTGGTGTCCCAGATCTTGTTTGGAACGAAACTTTAGTAGATTTTGCGCAAAACTATGCTAATCAACACAAGGCGGATTGTCAACTGGTCCACTCGGGTGGCATTTACGGGGAGAATCTCGCAGGGAGCACTGGTGGCTTGAGTGGCACGACTGCCGTGAAGTTGTGGGTGGATGAGAAAAGTGACTATGATCATGCTAGTAACTCATGTGCTGATGGTGCTGTATGTGGCCATTATACTCAGGTGGTTTGGAAAAATTCATTACGTCTTGGATGTGCAAAAGTGTCATGTGATAATGGAGGGACATTCATTTCTTGCAACTATGATCCCCCTGGCAACTATCAAGGCCAAAGCCCATACTAA 480 0.4542 MSSFSLLCVLGLFLIIGHVALAQDSPTDYVDAHNAARSEVGVPDLVWNETLVDFAQNYANQHKADCQLVHSGGIYGENLAGSTGGLSGTTAVKLWVDEKSDYDHASNSCADGAVCGHYTQVVWKNSLRLGCAKVSCDNGGTFISCNYDPPGNYQGQSPY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00314 159 PRINTS Venom allergen 5 signature 45 63 IPR002413 -
Trre3g00314 159 PRINTS Venom allergen 5 signature 114 133 IPR002413 -
Trre3g00314 159 ProSitePatterns CRISP family signature 2. 142 153 IPR018244 GO:0005576
Trre3g00314 159 FunFam Putative pathogenesis-related protein 1 23 159 - -
Trre3g00314 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 28 156 IPR001283 -
Trre3g00314 159 Gene3D CAP 24 159 IPR035940 -
Trre3g00314 159 CDD CAP_PR-1 26 159 - -
Trre3g00314 159 SUPERFAMILY PR-1-like 20 159 IPR035940 -
Trre3g00314 159 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Trre3g00314 159 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Trre3g00314 159 PRINTS Allergen V5/Tpx-1 family signature 91 104 IPR001283 -
Trre3g00314 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Trre3g00314 159 SMART SCP_3 24 155 IPR014044 -
Trre3g00314 159 Pfam Cysteine-rich secretory protein family 30 147 IPR014044 -
Trre3g00314 159 ProSitePatterns CRISP family signature 1. 116 126 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00314 Trre-Chr3 2089794 2090273 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00314 K13449 - gmx:100805116 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00314 3 2089794 2090273 Trre3g00314 3 2089794 2090273 ECH