Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00311 ATGAGTTCAATTTCTCTATTGTATTTCTTGGGCTTATTTCTCATTATTGATGTTGCACTTGCCCAAGACTCATCAACAGACTTTACCAATGCGCACAACGCAGCAAGATCTGCAGTTGGTGTCCCAAATATTGTTTGGAACAAAACTTTAGCTGAGGTTGCGCTAACCTATTCTAATAAACACAAGGCCAATTGTCGACTGGTTCACTCGGGTGGCCGTTATGGGGAGAATCTCGCGGGGAGCACCGGTGACTTGAGTGGCACGTATGCAGTGAAATTGTGGGTGGATGAGAAAAAAAACTACAATTATGGTAGTAACTCATGTGCTTCTGGTGCTGTATGTGGACATTATACTCAGGTGGTTTGGAAAAATTCCAAACGACTTGGATGTGCCAAAGTGAGATGTAACAATGGAGGAACATTCATTACATGCAATTATGATCCCCCTGGCAACTATGTTGGCCAAAGACCATACTAA 477 0.4277 MSSISLLYFLGLFLIIDVALAQDSSTDFTNAHNAARSAVGVPNIVWNKTLAEVALTYSNKHKANCRLVHSGGRYGENLAGSTGDLSGTYAVKLWVDEKKNYNYGSNSCASGAVCGHYTQVVWKNSKRLGCAKVRCNNGGTFITCNYDPPGNYVGQRPY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00311 158 CDD CAP_PR-1 27 158 - -
Trre3g00311 158 Gene3D CAP 23 158 IPR035940 -
Trre3g00311 158 ProSitePatterns CRISP family signature 1. 115 125 IPR018244 GO:0005576
Trre3g00311 158 ProSitePatterns CRISP family signature 2. 141 152 IPR018244 GO:0005576
Trre3g00311 158 SMART SCP_3 23 154 IPR014044 -
Trre3g00311 158 SUPERFAMILY PR-1-like 20 158 IPR035940 -
Trre3g00311 158 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 27 155 IPR001283 -
Trre3g00311 158 PRINTS Allergen V5/Tpx-1 family signature 141 154 IPR001283 -
Trre3g00311 158 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Trre3g00311 158 PRINTS Allergen V5/Tpx-1 family signature 114 130 IPR001283 -
Trre3g00311 158 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Trre3g00311 158 FunFam Putative pathogenesis-related protein 1 22 158 - -
Trre3g00311 158 Pfam Cysteine-rich secretory protein family 30 146 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00311 Trre-Chr3 2043922 2044398 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00311 K13449 - gmx:100807250 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00311 3 2043922 2044398 Trre3g00311 3 2043922 2044398 ECH