Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00302 ATGAAGTTGGGTTTCAGTTTTAGTACAAACTACTACACATTTCCACTCTCACCACCACCTTCCCTAATTTTCACCTCTCCTAAAATCTCACAACTTCCATTCTCTCACTCTCAAACCACTTCTTCAGGTAGAAAAAGATTAGTTTTTTGTGTGCAAAACATTGATCATCATCATCAAATTGAGTCAATACCTAGTGCTTTGATGGCTTCTGAACAAGAAATTTCACAAGTTAATAGAAATTTGTACCCTCAAATTGAACCCTATAGTACTGGTTTTTTGAAGGTTTCAGATCTTCATTCAATTTACTGGGAGCAATCAGGAAATCCAACTGGCCATCCAGTTATCTTCCTTCATGGAGGCCCTGGAGGGGGAACTTCCCCGAATAATAGGAGATTTTTCGATCCTGAATTTTACCGAATCATTCTATTTGATCAGCGAGGTGCAGGGAAAAGCACACCCCATGCTTGTTTAGAGCAAAACACCACATGGGACCTCATTGACGACATTGAAAAATTAAGAGAACATTTGGAGATTCCAGAATGGCAGGTATTTGGTGGGTCATGGGGAAGCACACTTGCTCTTGCATACAGCCAAACTCACCCGGATAAGGTTACTGGCATGGTCCTTAGGGGAATCTTCCTTCTAAGGAAGAAAGAGATTGATTGGTTTTATGAAGGTGGTGCTGCTGCAATATTCCCTGATGCCTGGGAGCCATTCAGAGATCTTATTCCAGAAAATGAGAGAGGATGTTTCCTTGATGCTTATAAGAAGAGATTAAACTCTGATGATATCGAAATTCAGTATGCAGCCGCTAGAGCATGGACCAAATGGGAAATGATGACTGCTCATCTTCTTCCAAATGAAGATAACGTCAAAAAAGGAGATGACGACTACTTTTCACTGGCATTTGCAAGGATCGAAAACCACTATTTTTCCAACAAGGGATTTTTCCCCGCTGACTCATTCTTGTTAGACAACGTTGATAAAATAAGGCATATCAACACCACAGTTGTTCAGGGAAGATACGATGTTTGCTGCCCTATGATGTCAGCCTGGGATCTTCATAAAGCTTGGCCAGAGGCAGATTTTCGGGTGGTTTCCGATGCAGGACATTCCGCCAATGAACCGGGCATATCCGCTGAACTTGTGGCTGCAAATGAGAAATTAAAAAACATAATAAAGAATAAAGGGGACTAA 1197 0.4127 MKLGFSFSTNYYTFPLSPPPSLIFTSPKISQLPFSHSQTTSSGRKRLVFCVQNIDHHHQIESIPSALMASEQEISQVNRNLYPQIEPYSTGFLKVSDLHSIYWEQSGNPTGHPVIFLHGGPGGGTSPNNRRFFDPEFYRIILFDQRGAGKSTPHACLEQNTTWDLIDDIEKLREHLEIPEWQVFGGSWGSTLALAYSQTHPDKVTGMVLRGIFLLRKKEIDWFYEGGAAAIFPDAWEPFRDLIPENERGCFLDAYKKRLNSDDIEIQYAAARAWTKWEMMTAHLLPNEDNVKKGDDDYFSLAFARIENHYFSNKGFFPADSFLLDNVDKIRHINTTVVQGRYDVCCPMMSAWDLHKAWPEADFRVVSDAGHSANEPGISAELVAANEKLKNIIKNKGD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00302 398 PANTHER PROLINE IMINOPEPTIDASE 45 395 IPR005944 GO:0004177|GO:0005737|GO:0006508
Trre3g00302 398 Gene3D alpha/beta hydrolase 78 390 IPR029058 -
Trre3g00302 398 NCBIfam prolyl aminopeptidase 86 389 IPR005944 GO:0004177|GO:0005737|GO:0006508
Trre3g00302 398 PRINTS Prolyl aminopeptidase (S33) family signature 140 151 IPR002410 GO:0006508|GO:0008233
Trre3g00302 398 PRINTS Prolyl aminopeptidase (S33) family signature 183 197 IPR002410 GO:0006508|GO:0008233
Trre3g00302 398 PRINTS Prolyl aminopeptidase (S33) family signature 114 122 IPR002410 GO:0006508|GO:0008233
Trre3g00302 398 Pfam alpha/beta hydrolase fold 113 374 IPR000073 -
Trre3g00302 398 SUPERFAMILY alpha/beta-Hydrolases 79 374 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00302 Trre-Chr3 1994217 1998371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00302 K01259 - gmx:100793450 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00302 3 1994217 1998371 Trre3g00302 3 1994217 1998371 ECH