Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00295 ATGGCAGCCACCACTAGAGCCATAACCATAGCAAGCAACTCAACCTACTCTATTCTTGCTAAGAAGCCATTTCTCGGTTCCCGTTCCCTTCGTCTCAACAATCTCAAGGTTTCTTCCACAACTACTAGGTCTTTTACTTGTAAGGCTATCTATTACCCTGAGGTTACTGTTAAGGAAGATGGTCAGCCTCAAACCCTTGATTATAGAGTCTTTTTTCACGACAAATCTGGCAAAAAGGTTTCTCCATGGCATGATATTCCCTTGCAGCTAGGTGATGGTGTCTTCAACTTCATTGTTGAAATACCAAAAGAATCCAGTGCAAAGATGGAAGTTGCCACTGACGAGCCTTTCACTCCCATAAAACAGGATATTAAAAAGGGAAAGCTTCGATTTTACCCCTATAATATTCATTGGAACTATGGCTTACTTCCACAAACATGGGAAGATCCATCTCTTGCAAACCATGAAGTTGAAGGAGCATTTGGAGATAATGATCCAGTTGATGTGGTTGAGATTGGTGAAAGCCAAAGGAAGATAGGAGAGGTTCTCAAGGTCAAACCCTTGGCTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCAAAAGCTTCACTTGTGAATGATGTTGATGATGTTGAGAAACATTTTCCAGGAACCCTCACTGCAATTAGGGACTGGTTCAGAGACTACAAGATACCTGATGGAAAGCCTGCTAATAGATTTGGTCTCGGCAACCAGGCAGTAAATAAGGATTATGCGCTAAAGGTAATCACAGAGACCAACGAGTCTTGGAGTAAACTTGTGAAGAGATCAATTCCTTCAGGAGAGCTGTCACTTGTGTAA 873 0.4147 MAATTRAITIASNSTYSILAKKPFLGSRSLRLNNLKVSSTTTRSFTCKAIYYPEVTVKEDGQPQTLDYRVFFHDKSGKKVSPWHDIPLQLGDGVFNFIVEIPKESSAKMEVATDEPFTPIKQDIKKGKLRFYPYNIHWNYGLLPQTWEDPSLANHEVEGAFGDNDPVDVVEIGESQRKIGEVLKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGNQAVNKDYALKVITETNESWSKLVKRSIPSGELSLV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00295 290 Pfam Inorganic pyrophosphatase 97 274 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre3g00295 290 SUPERFAMILY Inorganic pyrophosphatase 56 286 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre3g00295 290 CDD pyrophosphatase 93 272 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre3g00295 290 PANTHER INORGANIC PYROPHOSPHATASE 57 279 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre3g00295 290 FunFam Inorganic pyrophosphatase, mitochondrial 54 290 - -
Trre3g00295 290 Gene3D Inorganic pyrophosphatase 54 290 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre3g00295 290 ProSitePatterns Inorganic pyrophosphatase signature. 163 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00295 Trre-Chr3 1956544 1959264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00295 K01507 - gmx:100798544 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00295 3 1956544 1959264 Trre3g00295 3 1956544 1959264 ECH