Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00285 ATGGGGAAAAAGCGTGTAATGGTGCCGGCAAAGGACGTTGACTTGTCTTCTGTCAAATATGAACCTGAAATTGTTCAAGCTCCACATTTGACTGGATTTTTGTTTAGATTTTTTGTGAGGTTACTTGAAGCTCCATTCATAGGTCCTCTTCTTTTGACTCATTTGAAGAAGGAAAATAAAATCAATGAGTTATTGCGGAATACTGTGATACCTGAGGAACCCATGTTTAAACCTGAATATCCACCTCAAGAAAAGGAACATGGTGTTGTTGAGCTTGACGAAGATGGGAAACCTGAAGACCGAGTTAAGTCTGCCTTGAACTGTCTTCCACATTATGATCCTGCTAAGTTATGGGAGAATTCATCCGCACCCTTTCGGTACTGGAAAATACGTGACTTTGCTCATGCTTATCAGTTTAGAGAAGTAACCCCATCTATGGTTGCTGAGCGCATCATCTCAATTATAGAGGAGAATGAACTGGATAAACCTCCGACACCACTATTACTATCTTTTGATGCTGCAGAAGTCCGAAAGCAGGCAGCAGCATCTACTCAGAGGTTTGAAGCAGGAAATCCATTATCAATATTGGATGGAATTTTCATCGCTATCAAAGATGACATAGACTGCCATCCTCACCCGTCTAAGGGTGGATCTACATGGATGCATGAGGTACGTTCTGTAGAGAAGGATGCTGTCTGTGTTTCAAGACTGCGTAGTTGTGGTGTCATATTCATAGGGAAGGCAAATATGCACGAGTTTGGCATGGGTACGACAGGAAATAATTCTAATTACGGAACTGCAAGAAATCCTCATGCACCTGATAGATATACTGGTGGATCTTCGTCAGGTCCAGCTGCAATTGTTGCTTCTGGACTATGTTCTGCTGCACTTGGAACTGATGGTGGAGGTTCGGTCCGTATCCCTTCTTCCCTGTGTGGTGTGGTAGGATTGAAGATAAACTACGGGCGAATGAGCATGGAAGGGTGCTTATGTGATTCTGGGACAGTGGAAGTTATTGGACCCATTGCTTCATCAGTAGAGGATGCGATGCTAGTGTATGCTGCAATGTTGGGTGCATCGCCTGCAAATAGAATCAGTATGAAACCGGCAACACCTTGTTTGCCAACTTTGTCGTTCAATGATGATACACATGCTTTGGGATCATTAAGAATAGGGATCTACACCCCGTGGTTTAATAATGTTCATTCAACTGAAGTCTCTGATAAATGTGAGGATGCTCTTAATCTGTTGAGAAAGGCGCATGGTTGCGAAGTGAAAGAAGTTGTTATACCAGAGATTATGGAGATGCGAACTGCCCATGTTGTTTCCATTGGCTCTGAATGCGCATGTTCACTGAATCCTTATTGTGAAGACGGGAAAGGTGTCAAATTGACATATGATACTCGCACAAGTTTGGCACTTTTCCAGTCGTTTACAGCAGCAGATTACATTGCAGCCCAATGTATTAGACGAAGAATTATGCATTACTTCTTGGAGATTTTCAAGAAAGTTGATATCATAGTGACTCCAACAACTGGCATGACAGCGCCTAAAATACCTCCAAGTGCCCTTAAAAGTGGTGAAACAGATATGCCGACTACAGGTTACCTAATGCGGTTCGTTGTTCCAGCTAATCTCTTGGGATTCCCTGCCATTTCTGTCCCGGTGGGTTATGATAAAGAAGGACTTCCAATAGGTTTGCAAATAATTGGCCGACCATGGGCAGAAGCTACTATTTTGCGAGTAGCATCTGCAGTTGAGAAACTCTGCGGTGAGTCAAAGAAGAGGCCTGTGTCATACTATGATGTTCTGAGGGCTAACTGA 1824 0.4315 MGKKRVMVPAKDVDLSSVKYEPEIVQAPHLTGFLFRFFVRLLEAPFIGPLLLTHLKKENKINELLRNTVIPEEPMFKPEYPPQEKEHGVVELDEDGKPEDRVKSALNCLPHYDPAKLWENSSAPFRYWKIRDFAHAYQFREVTPSMVAERIISIIEENELDKPPTPLLLSFDAAEVRKQAAASTQRFEAGNPLSILDGIFIAIKDDIDCHPHPSKGGSTWMHEVRSVEKDAVCVSRLRSCGVIFIGKANMHEFGMGTTGNNSNYGTARNPHAPDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKINYGRMSMEGCLCDSGTVEVIGPIASSVEDAMLVYAAMLGASPANRISMKPATPCLPTLSFNDDTHALGSLRIGIYTPWFNNVHSTEVSDKCEDALNLLRKAHGCEVKEVVIPEIMEMRTAHVVSIGSECACSLNPYCEDGKGVKLTYDTRTSLALFQSFTAADYIAAQCIRRRIMHYFLEIFKKVDIIVTPTTGMTAPKIPPSALKSGETDMPTTGYLMRFVVPANLLGFPAISVPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGESKKRPVSYYDVLRAN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00285 607 SUPERFAMILY Amidase signature (AS) enzymes 107 590 IPR036928 -
Trre3g00285 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Trre3g00285 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Trre3g00285 607 PANTHER TRANSAMIDASE 121 603 IPR000120 GO:0003824
Trre3g00285 607 Pfam Amidase 169 580 IPR023631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00285 Trre-Chr3 1906730 1915041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00285 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 66.447 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00285 - - gmx:100800479 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00285 3 1906730 1915041 Trre3g00285 3 1906730 1915041 ECH