Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00282 ATGGGTAGTACCAGTAAGAACAAACGAAACAATTCCGTTTCCGACGAACACGAAGAAACCAAAGATTCTCACGACAAACCACTCAATAAAAAACCTAAAACCACCGATTCTACCGCCACGCCATCTTCCACCAAACCAACAATGGAAACTCATAAAAAAAGTAAAGCTTTTGACAAAAAGAGGCGTAGCGACAAATTGAAATCCAAATCAAAATCCGAACCGATTGATTTGGATTCCGAACCTACAGCTTCGGATTCCAAACCTGCTGCGGATTCGACTAGTGGTAGTGGCGGTGATTCTCCTCCGGAGTTTCACATTGGTGTGTTTAAGGATTTAGCTGTGGTTAATGAATCGGCTAGGTCAGCAGCTGCTAAACAAATGGTGACGGAGTTGAAGGCTATTCAGAATGCTTATGGTGGTGTTCAAGAGATGGAGATTGGTGATGGTGGTTTTAAGCTTGAAGCTGAGAAGAATGATGGATTGGATGAATGCGCACCATCTGTTCGATATGCTGTTCGTAGGCTTATTCGCGGTGTTTCTTCTTCAAGAGAGTGCGCGCGACAAGGTTTTGCTTTAGGCTTAGCAGTTTTAGTTGGTGCTATCGACAAAATCAGGGTTGACTCGTTCCTTAAGCTTGTAGTAGATTTATTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTCTTCTGGGTCGCTTATTCGCTTATGGTTCGCTGGCTCGATCAGGAAGACTTATCCACGAATGGAGCATTGATAAAAATACTCCATACATAAAAGAATTTGTTGGTATACTTATCTCCCTTGCAAGTAAGAAGCGATACTTGCAAGAGCCTGCCGTCTCAATAATTTTAGAATTGGTTGAAAAGTTGCCTGTTGAAGCATTAGCAAGTCATGTTATTGAAGCTCCTGGACTCGACAAGTGGTTTGAATCTGCTGCAGAAGTAGGAAATCCTGATGCTCTATTCCTTGCTTTAAAAGTTCGTGAGAAAATTTCTATTGACAGCTCCATATACGGGAAACTACTGCCAAATCCATTCAGCTCTAGCCAGCTCTTCTCTACCGATCACCTGTCCTCCCTGAGTAATTGTTTGAAGGAATCAACCTTCTGTCAGCCCCGTGTTCATAGTATCTGGCCAGTTTTGATAAATATGCTCATACCCAATACTGTTCCACAGTTGGAAGATGTGGCATCAGCTTCAAATTCATTAAAGAAACATAAGAAGAGTAGAAAATCTTGCTCTTCTGATGAAGAAATTGCGAAGAATCTCGAGTCTTTTTGCCAAATTATTATTGAAGGATCCCTTCTCTTCTCATCTCATGACCGTAAGCGCTTAGCTTTCGATGTTATGTCTCTTCTTCTACAAAAGCTGTCTGCGTCTTTAATTCCAGTTGTTCTGTCAAACAAAGTAGTTCAGTGCCTGATGGATATACTATCAACAAATAACACATGGCTGCATAAAGTTGGACTACATTTTCTTAAACAATTGACAGATTGGGTGGGGGACGATGATGTCAAAAGAGTTGCTGTTATAGTGGCTATACAGAAGCACAGCAATGGAAAATTTGATTGTATCACAAGGACAAAGCATGTTAAAAATTTGATGTCACGGTTCAAAACAGAACCTGGTTGCATGCTTTTTGTGCAAAACTTGATGAACCTGTTTGTGGATGAAGATAATACCTTGGAAGAACCTTCAGACCAGAGTCAAACAACAGATGAAAATTCTGAAATAGGCTCTATTGAGGATAAAGGTTCTCCTAGGACTAATGGTAATTCAGACTTATTGAAGAGATGGGTTATAGAATCCCTTCCTGGTATTTTGAAATTCGATGAGGGGGTCCACGAGGAGATGTTCCGAGTACAAAAAGAAATAATGAAATTTCTGGCTGTTCAGGGTCTGTTCACTGCATCTCTTGGCACTGAAGTTACTTCATTTGAGTTGGACGAGAAATTTAGGTGGCCCAAATCTCCCACATCAAATTCTCTTTGCAAGATGTGTATTGAACAGCTGCAGTTGTTGTTGGCTAATGCTCATAAGGTAGAGAGCTTGGCTAATGCTAAAAGCCTTGAGCCTAATGATCTGGGTTCGTACTTCATGAAGTTCTTCAGCACCTTGTGCAATATTCCTTCAGTTTCCCTCTTCCGGTCTTTAGATGATGAGGATGAAAAAGCAGTGAAAAATTTGCAAGCAATGGAAGCTAAATTATCAAGAGAGGAAAGGAGCCACGACTGCAGTGATGATGCAAATAGAGATCGTGCACTAAGATACTTGCTTATCCAGTTGCTCTTGCAAGTCCTTCTTTGTCCAAGGGAGTACTCAGAAGCTGCATCTGAACTCATCATCTGTTGTAAGAAAACATTTACTACTTCTGATATTCCCGAGTCCTCTGGAGAAGACGACACAGAGCTTGGTGATGCACCTGAATTGATGGATGTTCTTGTGGATACGTTGCTTTCTCTGCTTCCACAGTCATCGGCTCCTATGCGGTCTGCTATTGATCAGGTGTTCAAATATTTTTGCAATGATATCACAGATGATGGGCTGATGCGGATGTTACGAGTCATAAAGAAAAATTTAAAACCAGCAAGACATCCAGATGCGGCTAGTGCAGATGAAGATGATGATGATGAGGATGATGACTTATTCAATATTGAAGATGAAGAAATTGATCAAGCCGAGACTGGTGAAACAGGTGATAGCGATGGGCAGACTGATGACTCTGAGTCTATAGTTGAGGCAGAGGAAACTGGTGAGGACCATCATGCAGATTCTGATGATTCAGATAGTGGGATGGATGATGATGCTATGTTCAGGATGGATACATATCTTGCTCAGATTTTCAAAGAAAAGAAAAATCAGGCCGGAAGTGAAACTGCTCATTCCCAACTTTTGTTGTTCAAATTCCGCATCCTTTCATTATTGGAAATTTTCCTACGCGAAAATGCAGGCAAGCCTCAGGTTCTTACTGTGTACTCACATTTGGCTAGGGCGTTTGTTAACCCACATACTGCTGAAGTTAGTGATCAGCTTAGTCAGCGTATATCGGGAATATTGCAAAAGAAAATACTTAAAGGAAAGGTGGCTTGTCCAAAGGGCGACGAAATCCAATTATCGACACTTGAATCTCTGTTGGAGAGAAATTTAAAACTAGCATCAAAACCATTTAAAAAGCAAAAGTCTGCAACCGACCCCTCAAAGCAAAAGTCTGCCTTAACCCGATACAAAAAGGTTTCTGACTTTGCCAAAACATCAACTTTATGGATTTTGAGAATTGTCGATGCAGGAAATTTCACGGAGTCCGAACGGCAGAGGATTGTTCAAGTTTTCCAGAAAACAGTGGCAGATTATTTAGACAGTAAGAAGTCTCAAATCAAAGCTGGATTTTTAAAAGAAATAATTCAAAGAAGACCATGGATTGGCCATGGTGTATTTGGCTTTTTGTTGGAGAGATGTGGAAGTGCCAAGTCAGACTTTCGGCGAGTTGAAACCCTTGATTTGGTAATGTACATATTGAAGTGCTTAGCAACCTTGAGTGGTGAAGGGCAGAATGCATCAAAAAAGATTGTTAAAAACAATTTGGAAAAACTCTCTCATGCTATGAAAGAGTTTGTGACAAATATGCCGAGCAAACCAGCAAGAAGGACAGCTGTACACAAGTTTTGTTCCGAGGTCTTCAAGATCATGGCTAAACACAACCTCACCAAGTATCTTCTTAAAACATTGGCACCTGATGCTCAAGCTGCCCTCGAAGCACAACTGGGCGAGAAATTTGTTAGTTTGAAGAAGCTGGAAAAATGA 3810 0.4092 MGSTSKNKRNNSVSDEHEETKDSHDKPLNKKPKTTDSTATPSSTKPTMETHKKSKAFDKKRRSDKLKSKSKSEPIDLDSEPTASDSKPAADSTSGSGGDSPPEFHIGVFKDLAVVNESARSAAAKQMVTELKAIQNAYGGVQEMEIGDGGFKLEAEKNDGLDECAPSVRYAVRRLIRGVSSSRECARQGFALGLAVLVGAIDKIRVDSFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGSLARSGRLIHEWSIDKNTPYIKEFVGILISLASKKRYLQEPAVSIILELVEKLPVEALASHVIEAPGLDKWFESAAEVGNPDALFLALKVREKISIDSSIYGKLLPNPFSSSQLFSTDHLSSLSNCLKESTFCQPRVHSIWPVLINMLIPNTVPQLEDVASASNSLKKHKKSRKSCSSDEEIAKNLESFCQIIIEGSLLFSSHDRKRLAFDVMSLLLQKLSASLIPVVLSNKVVQCLMDILSTNNTWLHKVGLHFLKQLTDWVGDDDVKRVAVIVAIQKHSNGKFDCITRTKHVKNLMSRFKTEPGCMLFVQNLMNLFVDEDNTLEEPSDQSQTTDENSEIGSIEDKGSPRTNGNSDLLKRWVIESLPGILKFDEGVHEEMFRVQKEIMKFLAVQGLFTASLGTEVTSFELDEKFRWPKSPTSNSLCKMCIEQLQLLLANAHKVESLANAKSLEPNDLGSYFMKFFSTLCNIPSVSLFRSLDDEDEKAVKNLQAMEAKLSREERSHDCSDDANRDRALRYLLIQLLLQVLLCPREYSEAASELIICCKKTFTTSDIPESSGEDDTELGDAPELMDVLVDTLLSLLPQSSAPMRSAIDQVFKYFCNDITDDGLMRMLRVIKKNLKPARHPDAASADEDDDDEDDDLFNIEDEEIDQAETGETGDSDGQTDDSESIVEAEETGEDHHADSDDSDSGMDDDAMFRMDTYLAQIFKEKKNQAGSETAHSQLLLFKFRILSLLEIFLRENAGKPQVLTVYSHLARAFVNPHTAEVSDQLSQRISGILQKKILKGKVACPKGDEIQLSTLESLLERNLKLASKPFKKQKSATDPSKQKSALTRYKKVSDFAKTSTLWILRIVDAGNFTESERQRIVQVFQKTVADYLDSKKSQIKAGFLKEIIQRRPWIGHGVFGFLLERCGSAKSDFRRVETLDLVMYILKCLATLSGEGQNASKKIVKNNLEKLSHAMKEFVTNMPSKPARRTAVHKFCSEVFKIMAKHNLTKYLLKTLAPDAQAALEAQLGEKFVSLKKLEK 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00282 1269 MobiDBLite consensus disorder prediction 10 32 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 61 80 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 33 47 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 890 938 - -
Trre3g00282 1269 SUPERFAMILY ARM repeat 184 531 IPR016024 -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 85 99 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 865 884 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 890 917 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 1 103 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 565 593 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 918 938 - -
Trre3g00282 1269 MobiDBLite consensus disorder prediction 568 593 - -
Trre3g00282 1269 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 94 1266 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Trre3g00282 1269 Pfam DNA polymerase phi 170 982 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00282 Trre-Chr3 1879111 1886305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00282 K02331 - gmx:100787296 1810.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00282 3 1879111 1886305 Trre3g00282 3 1879111 1886305 ECH