Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00279 ATGGAACTAGCTAGGCATAGAGGAATGGAGAATGGGGGAACTGAGGAAATTGATGTTGAAAGTGCTATGGATGAGCATAGATTTTATGCTTCTCATCCTTTTGGTTTGGTGAAGAAGAGAGCTTATATATTTGATGGTTTGGGAAATTTTTATAATAAGGAATGGGATTTGGCAGACCTTTATAAAAAAGAAGAAAAGGAATCGGTTGCGGTGGAAGGACGAGGGAATGAGTTTTCTTGGTACCATGTGGAACTTCCAAAAGGTAATCAAAAGTTGGCGCAATCTGCACAGGATTTGATTGGTGTTTTATGTCCACCTTTGAAACTCCAGGATATTCTTTCACTTGTTAGCAATGGACCCTTTTGTGCACATGTTGATGGTGCACTTGTGTTTCGGGTTAATTCGCCTGGCCCTCCTTCCAGTGATTTTACATTTAGACTTGCTGCTAGAGTTACGGAGAATTCGGTGATTACCGTGTCATTGGGGCGTGTTCCTCGGCTAGGTTTCTCACGTATGGGCGAATCTTTACTTTCGGAAATTCCTAGAGTTGAAAGCTCCTCTCGTTTTAGTGGTCAGCAGAAGGAAGGAAGTGGGACCGTGATTAAGGAACATGTTCTTGAATTCTTATTGACTATGAATCATTCGGAGGAAGCTGACAATCCTGTTCCTAGATCTGTCTCAGATCTTGTGGTTCACATAATTGATACACATGTAGATCAGCTTCAAGATCTTGTGACAAAGCTTGAGATGGAGTTGGACTCTGTGGAGCTTGATCTGGATAAAGGTGGTTATGCTTTGAAGAAACAAATGCTAGATGATAGAAGATTCCCCAAACTACATATTAATTTGCAGCGGCTCCTGCAGGTGATTGCCCATGGAGAACAAGTGTATCTTCGTGTCAAAGAAAAATCCTCTTCAAAAAGATGGTTTGCGAGCGAAGACATTAACTCCCTTGAAGAACTAATTGGAAGGTTGAGGAGGCTAAAAGAGAATGTAGGGTTTATAGTTAATCGTGTCACAGCAATACAGGCTAGTCTTGACAGTTGGCAGTCGGAGCAAATAAACCGTAAACTGTATTATCTTTCGTTCCTTTCAATAATATTCCTCCCCTTATCCATCATAACAGGAGTGTTTGGCATGAATGTCGGAGGAGTTCCATGGACAGGTCAAAATTCGCCAGAGTTAAAGGATGGTTTTCGCAATGTTATGTTAGTCTGTGTCGCTATGCTTGTTTTTGTACTACTCTGTTTCCTTTTCCCAGCTCTTTATACGCGGATAGTTACTGGTTGGCGAGAAAAGAGAACTCTCGGAAAAAACTGGTCGCTGAACAAGAAGTCATTGCTCAGGAGACCGTTAAGAATAGATGATGCGGCAAGAGGGGGTTACCTTCGGATTTAA 1398 0.4177 MELARHRGMENGGTEEIDVESAMDEHRFYASHPFGLVKKRAYIFDGLGNFYNKEWDLADLYKKEEKESVAVEGRGNEFSWYHVELPKGNQKLAQSAQDLIGVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRLAARVTENSVITVSLGRVPRLGFSRMGESLLSEIPRVESSSRFSGQQKEGSGTVIKEHVLEFLLTMNHSEEADNPVPRSVSDLVVHIIDTHVDQLQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVIAHGEQVYLRVKEKSSSKRWFASEDINSLEELIGRLRRLKENVGFIVNRVTAIQASLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNSPELKDGFRNVMLVCVAMLVFVLLCFLFPALYTRIVTGWREKRTLGKNWSLNKKSLLRRPLRIDDAARGGYLRI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00279 465 Gene3D Magnesium transport protein CorA, transmembrane region 350 422 - -
Trre3g00279 465 Gene3D Magnesium transport protein CorA, transmembrane region 223 349 - -
Trre3g00279 465 Coils Coil 238 258 - -
Trre3g00279 465 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 353 417 IPR045863 -
Trre3g00279 465 SUPERFAMILY CorA soluble domain-like 75 350 IPR045861 -
Trre3g00279 465 Coils Coil 311 331 - -
Trre3g00279 465 PANTHER OS08G0130000 PROTEIN 15 465 - -
Trre3g00279 465 Pfam CorA-like Mg2+ transporter protein 218 418 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00279 Trre-Chr3 1861980 1864982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00279 - - psat:127083848 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00279 3 1861980 1864982 Trre3g00279 3 1861980 1864982 ECH