Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06171 ATGGGTTGTGTTGCTTCCAAACTAGAGGAAGAAGAAGAAGTTGTAGCCATCTGCAGAGAGAGAAAACGTCAGCTGAAGTTAGCTGTAGAGAAAAGATATGCACTTGCTGAAGCTCATTGTAAGTATTTTCACTCTTTGAATGCAGTAGCTGCAGCTATTAAGCTTTTTGTTGCAAGACATTCTTCACTTTCTTCACCTTTTCTTATAACTTTCCCTCCTAAGGGTTTTGACCCTTCTCCTTCTCATTCATCATCCAATGAAAATGTCATAAATAACCCTATGTTCCTTCAGCAAACACCATCTGAGACAAAACATGAATCTATTGCTGCTTGTGATTCATGCATTGTTTCAACAACCACCTCAGAGTCTTCTGAGGATGAGGGAGAGGTTGAAGAAGGTTGTAGAGAAGAACAGAATGAACAACAGGCAAGTGAGTATTTCTACATGCATATGCCTATGAATATGAATATGAATATGAATATGAATATGAACATGCCTATGCATATGTCTATGCCTCCACCTGCAATGCCATCTCCACAGAGAGATTTTGGTTGGGATTTCTTTTACCCTTTTGATAGTGTGAGACAAGAGGTTATGAGTGGCTACCATAGGAACTCAGATGATGATTTGAGGGCAGTGAGGGAGGAAGAAGGGATTCCTGAGTTAGAGGATGAAATGGAAAGGGGGGAGATTGAGCATAAGGTTGCAGTGAGTGTTGAGGAGAAGAGTAATCATGAAGGTGGAGGTGGAGGACAAGTTGTGAATGGTGTTGAAGACGTGAAGGCGGTGGATGTGGCTAATGAAAATGTTGGAGAGCAAAAGGGGCTTGCTGTTCTTGATACACCTGCAGAAGGGAGAGAGTTGCTTGAAGCTTTGAAAGATATTGAGGATCATTTCGTTAGAGCTTATGAGTCTGGTAAGAATGTGACAAAGATGCTTGAGGCTAATAGAATTCCTCTTCATTCTAGTTTGGAGGAAATCAAAGAAAGCTCGACCAAACTCATCAATGCAATAACCTGGAAGTCCATGTCATCTAGGCAATCATCATGCAAGAGTTTGGTGGTTCAAAATATGAAAGATTCTTCAAATTGGGTGGAATATAAGAATGATCTGTTTGATGATTATGGAGGGATGGATTCTGGAAGTCATTTATTAACATTAGGAAGGTTATATGCATGGGAAAAGAAACTTTTTGAGGAGGTTAAGGCTGGAGATAGCACACGGAAAAATTACGATAAGAAATGTGCGCAATTGAGAAATAAGAATGTTAAAGGAGATGATGAATTAAGCATGGACAAGACTAGAGCTGATATGAAGGATCTATATGCTGGGATCTTGGTTGCAATTCGACGTGCAGAATCAATCTCAAAGAGAATTCAGAAAATGAGAGATGAAGAATTACAACCTCAAATTGTTGAACTACTGAAAGGCCTTACACAATCATGGAAAATCATGTTGGAGTCGCATGAAACGCAAAAGAAGATTCTTTCTGAAGTCAAATACTTCACATGTCCCGCAGACGGCAAATTTTGCAATCAATCTCGTGGATTGGCAACTCTTCAGCTTGAAGCTGAGCTCCACCATTGGCGCGTGTGTTTTAGAGAGTATACCGCAGCTCAAAAAGCATATGTAGAAGCTCTTCATGGATGGTTAAATAAGTTCATAGTCCCTGAAGTTGAATTTTACTCGAGAAGCAAAAATGTTGGTATGCCAATACCATTTCAAGTTAATGGGCCGCCTTTACTTGTGATATGCAACGATTGGTTAACTTCTATGCGAAAGTTGCCTGATAAGACGGTAACACTTGCATTGAAAAGTGTTGTGAAAGATGTGAAAGCTCTTTGGATTCAACAAAGTAAGGAGCAACAGCAGAAGAGGAAAGTAGAGAGCTTAACAAAAGATTTAGATAGAAGATATCTAGGATCATATAAACTGAAGACAAAGATGCTTGAGTTGCAAGTAACAGATCATAGATCAGAAGAGGGAACTGAAGAAGAATGCATGATGGAAAAAAGTGATTATTTGGAGACATTGAGGAGAAAACTCGAGGTAGAGAAGGAGAAGCATTACAGTTGCATTCAAGAAACACAGAGGATGACATTGAATGGATTGCAATATGGATTTTCCCAAGTACTTGAATCTTTGACAGAGTTCTCTAAAGCATCACAGAAAATGTACAATGATCTTGTGACTTTTAGTGAAAATAGTGAGATAGCCGGGAACATTTCGTATATAGGTGGTTGCAATGCGGAAAACTGTAACGGCCAAAATGGACAATAG 2280 0.3939 MGCVASKLEEEEEVVAICRERKRQLKLAVEKRYALAEAHCKYFHSLNAVAAAIKLFVARHSSLSSPFLITFPPKGFDPSPSHSSSNENVINNPMFLQQTPSETKHESIAACDSCIVSTTTSESSEDEGEVEEGCREEQNEQQASEYFYMHMPMNMNMNMNMNMNMPMHMSMPPPAMPSPQRDFGWDFFYPFDSVRQEVMSGYHRNSDDDLRAVREEEGIPELEDEMERGEIEHKVAVSVEEKSNHEGGGGGQVVNGVEDVKAVDVANENVGEQKGLAVLDTPAEGRELLEALKDIEDHFVRAYESGKNVTKMLEANRIPLHSSLEEIKESSTKLINAITWKSMSSRQSSCKSLVVQNMKDSSNWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYDKKCAQLRNKNVKGDDELSMDKTRADMKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCPADGKFCNQSRGLATLQLEAELHHWRVCFREYTAAQKAYVEALHGWLNKFIVPEVEFYSRSKNVGMPIPFQVNGPPLLVICNDWLTSMRKLPDKTVTLALKSVVKDVKALWIQQSKEQQQKRKVESLTKDLDRRYLGSYKLKTKMLELQVTDHRSEEGTEEECMMEKSDYLETLRRKLEVEKEKHYSCIQETQRMTLNGLQYGFSQVLESLTEFSKASQKMYNDLVTFSENSEIAGNISYIGGCNAENCNGQNGQ 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06171 759 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Trre1g06171 759 Pfam Protein of unknown function (DUF632) 288 612 IPR006867 -
Trre1g06171 759 PANTHER UNCHARACTERIZED 1 734 - -
Trre1g06171 759 MobiDBLite consensus disorder prediction 119 139 - -
Trre1g06171 759 Coils Coil 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06171 Trre-Chr1 65537999 65541224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06171 170 640 Acyl Lipid Metabolism Gene Families AT2G27090 30.297 7.94e-55 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06171 - - gmx:100807897 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06171 1 65537999 65541224 Trre1g06171 1 65537999 65541224 ECH