Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06155 ATGGGAGTCACAATTTTTTCCAAAAAAAATTGTACCTCCATACTCTCAATTCTTATTTTGCTATGTAGTTTTCTCTTGAACAGTGTCATGGCTAGTGTTTATGCTGTTGGTGATCAAGATGAATGGAGTAGCCAGACAAATTATGCTACATGGGCAGAAAAATACAATTTTAGCCTTGGAGATGTTCTTGTTTTCAAGTATGTGAAGGGGCAACATAATGTGTATGAAGTTAGAGAGGACAGTTTTAGATCATGTGAAACAAGTAGTAGTGGAGTGTTGGCTAAGTATGAGAGTGGTGAAGATCAAGTGGTTCTCAATAAGGTCAAGAAATATTGGTTCATTTGCAATATAGTTGGTCATTGCCTTGGAGGAATGAGGTTTGGAATTGAAGTTAAAAATGATAGCAACAAAAATGTTACTAATTCCATGGATGGTGGTGAATTAAATCCACAAATTCAACCAACTTCATTAGAAAATTCTTGTATCTCTCAAAGATGGAGAGTGATTGGGATGTTCATTCCTCTTGGAACTGGATTATTATTATTGTTCAACTTTTATTTTTGA 564 0.3475 MGVTIFSKKNCTSILSILILLCSFLLNSVMASVYAVGDQDEWSSQTNYATWAEKYNFSLGDVLVFKYVKGQHNVYEVREDSFRSCETSSSGVLAKYESGEDQVVLNKVKKYWFICNIVGHCLGGMRFGIEVKNDSNKNVTNSMDGGELNPQIQPTSLENSCISQRWRVIGMFIPLGTGLLLLFNFYF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06155 187 Pfam Plastocyanin-like domain 42 125 IPR003245 GO:0009055
Trre1g06155 187 ProSiteProfiles Phytocyanin domain profile. 32 133 IPR003245 GO:0009055
Trre1g06155 187 FunFam Blue copper binding protein-like 30 136 - -
Trre1g06155 187 PANTHER BLUE COPPER PROTEIN 30 133 IPR039391 GO:0009055
Trre1g06155 187 SUPERFAMILY Cupredoxins 31 131 IPR008972 -
Trre1g06155 187 CDD Phytocyanin 33 131 - -
Trre1g06155 187 Gene3D - 30 137 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06155 Trre-Chr1 65432542 65433363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06155 16 145 Miscellaneous Gene Families AT2G31050 41.985 8.77e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06155 - - gmx:100788784 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06155 1 65432542 65433363 Trre1g06155 1 65432542 65433363 ECH