Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06147 ATGTCTGATGAACGAGATGTGCATCCTGATTGCCGGAATGCAAGTAATCCTTATCACGAATGTACTGATTACTGCTTTAGAGTCATAGCTGAAGCCAAACTCAGGATTCAGCAACATCATCAATCTGAAGTTGCACACGCTAGTGGTGGCAGTCGCCAGGAGGAAGCCATCCCGAATGAATTGTATCCTGACGAGGGAACACATGACGACGGACCGAGACCTGAAGAAAATTCTGATAGCGACCCTGATCAGCCTGAGCCTGCTCAAGAGAACATGGAGGATGGCTCCTTCCCGAAACTCTCTGCCAGACAGAAAAAGTGGATGGATTTGAGAGCCAAAATGCAAGAAGCCAAAAAACGTAATCAAATTGAAATAGCGAATGAAAAAAAGAGGATGGAACCTCCAACCGAGTCTAGGGGTGTGTCTAAACAAAAGTGGCTTGAAGATAGGAAGAGAAAGATTGGAAAGCTTCTTGATGCAAATGGCTTGGATATGACAAAAGCTTATATGCTTGACACACAAGAGGCTGCAGAAGTGAAATACAAGAAATGGGAGAAGGATCCTGCTCCATTCGGTTGGGATGTTTTTAATCAGAAGACATTATACAATGCATACAAAAAGCGGACCAAGAACATTGAGATTGACGTAGAAGAATACAATAGAATGAAAGAAGCTGATCCAGAATTCTACCGTGATGCTTCAAGTCTCCAATATGGAAAGGCGCCGAAAACTTCAGAGGATAAGATTGACAGGATGGTACAAGAGCTGAAAGATAGGGATGCGAAGCGCGGGTCATTTAGCAGGAGAAGAACATTTCGCGAAGAGAAAGATGTTGACTCGATCAATGACCGTAATGAGCATTTCAATAAGAAGATTGAACGTGCCTTTGGCAAATACACATTGGAGATTAAAAATAATCTTGAGCGTGGAACTGCATTGCCCGACTGA 948 0.4325 MSDERDVHPDCRNASNPYHECTDYCFRVIAEAKLRIQQHHQSEVAHASGGSRQEEAIPNELYPDEGTHDDGPRPEENSDSDPDQPEPAQENMEDGSFPKLSARQKKWMDLRAKMQEAKKRNQIEIANEKKRMEPPTESRGVSKQKWLEDRKRKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEIDVEEYNRMKEADPEFYRDASSLQYGKAPKTSEDKIDRMVQELKDRDAKRGSFSRRRTFREEKDVDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06147 315 Coils Coil 111 131 - -
Trre1g06147 315 Pfam SYF2 splicing factor 161 308 IPR013260 -
Trre1g06147 315 MobiDBLite consensus disorder prediction 58 80 - -
Trre1g06147 315 MobiDBLite consensus disorder prediction 38 145 - -
Trre1g06147 315 MobiDBLite consensus disorder prediction 104 145 - -
Trre1g06147 315 PANTHER GCIP-INTERACTING PROTEIN P29 5 313 IPR013260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06147 Trre-Chr1 65387065 65389340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06147 K12868 - gmx:100787714 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06147 1 65387065 65389340 Trre1g06147 1 65387065 65389340 ECH